Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 526 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  119 bits (299), Expect = 2e-31
 Identities = 126/472 (26%), Positives = 205/472 (43%), Gaps = 52/472 (11%)

Query: 95  YNRLAFLDKGGTPQME-LAEAIE-TKDAKTWTVKLRKGVTFHDGKP------LAADDVIF 146
           YNRL     G T  +  LAE  + ++D KT+T  LRKGV +   K       L ADDV+F
Sbjct: 52  YNRLVEFKTGTTEVIPGLAEKWDISEDGKTYTFHLRKGVKWQSSKDFKPTRELNADDVVF 111

Query: 147 SLKRHLDP-------SVGS----KVAKIAAQMTGFKAVDKQTVEITLASPNADLPTILSM 195
           S  R  +        S GS    +   +   ++  K VD  TV+  L  P A     L+M
Sbjct: 112 SFDRQKNEQNPYHKVSGGSYEYFEGMGLPDLISEVKKVDDHTVQFVLTRPEAPFLADLAM 171

Query: 196 HHFMIVAD---------GTTDFSKGN--GTGAFVREVFEPGVRSVGIKNKNYWKSGPNVD 244
               I++          GT +    N  GTG F    ++   R +      YW + P +D
Sbjct: 172 DFASILSKEYADNMLKAGTPEKVDLNPVGTGPFQLVQYQKDSRILYKAFDGYWGTKPQID 231

Query: 245 SFEYFAISDDSSRVNALLSGDIHLAATINPRSM-RLVESQGAGFVLSKTTSGNYTNLNMR 303
              +    D S R   L   +  +    NP  + R+ E +    +     +  Y + N++
Sbjct: 232 RLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKEDKNINLMEQAGLNVGYLSYNVQ 291

Query: 304 LDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPE 363
              +P       + + Y VN+E I+K+  +G G V     + P  + +N D+K   +DPE
Sbjct: 292 --KKPLDDVKVRQALTYAVNKEAIIKAVYQGAG-VAAKNLIPPTMWGYNDDIKDYGYDPE 348

Query: 364 KAKFHFEKAGM-LGQSIPVVASDAAN----SAVDMAMIIQASAAEIGLKLDVQRVPADGY 418
           KAK   ++AG+  G +I + A         +A  MA +IQA  A+IG++  +        
Sbjct: 349 KAKALLKEAGLEKGFTIDLWAMPVQRPYNPNARRMAEMIQADWAKIGVQAKIVTYE---- 404

Query: 419 WDNYWLKAP------VHFGNINPRPTPDILFSLLYSSEAPWNESQYKS---EKFDKMLIE 469
           W  Y  +A       V  G       PD  F+ L+S +A    S Y     + F+ ++  
Sbjct: 405 WGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCDAAQQGSNYSKWCYKPFEDLIQP 464

Query: 470 ARGSLDQERRKAIYNEMQVMVASEAGTIIPAYISNVDAITAKLKGLEANPLG 521
           AR + D  +R  +Y + QV++  +A  +I A+ +  + +  ++KG   +PLG
Sbjct: 465 ARATDDHNKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDPLG 516