Pairwise Alignments

Query, 536 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 1e-30
 Identities = 117/473 (24%), Positives = 193/473 (40%), Gaps = 52/473 (10%)

Query: 95  YNRLAFLDKGGTP-QMELAEAIE-TKDAKTWTVKLRKGVTFHDG------KPLAADDVIF 146
           YNRL    KG T  +  LAE  + + D   +T  LRKGV FH        +   ADDVIF
Sbjct: 57  YNRLTEFKKGTTEVEPGLAEKWDVSSDGLEYTFHLRKGVKFHSNDKFTPSRDFNADDVIF 116

Query: 147 SLKRHLDPSV--GSKVAKIAAQ----------MTGFKAVDKQTVEITLASPNADLPTILS 194
           S  R  D        +A I  +          +     VD  TV+  L  P A     ++
Sbjct: 117 SYNRQGDTKNPWNQYIAGITYEYYNSMEMPSLIKEIVKVDDYTVKFVLTRPEAPFLANIA 176

Query: 195 MHHFMIVADGTTD-FSKGN----------GTGAFVREVFEPGVRSVGIKNKNYWKSGPNV 243
           M    IV+    D   K            GTG F    ++        KN +YW   P +
Sbjct: 177 MPFASIVSKEYADTLEKAGTKEDFNNLPIGTGPFKFVAYQKDAVIRYQKNADYWGDAPKI 236

Query: 244 DSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVESQGAGFVLSKTTSGNYTNLNMR 303
           D   +    D + R+  L +G+ HL     P  +  + +      L +    N       
Sbjct: 237 DDLIFAITPDAAVRLQKLKAGECHLMPYPAPADLSTIRAD-KNLKLDEQPGLNVAYFAYN 295

Query: 304 LDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNPDLKPRAFDPE 363
             + P  K +  + +   +N++ I+ +  +G G V  + P+ P  + +N  +K  A+DPE
Sbjct: 296 TTVAPFDKPEVRKALNMAMNKQAIIDAVFQGAGTVAKN-PIPPTMWSYNDSIKDDAYDPE 354

Query: 364 KAKFHFEKAGMLGQSIPVVASDAAN----SAVDMAMIIQASAAEIGLKLDVQRVPADGYW 419
            AK   E AG+   ++ + A         +A   A +IQ+  A++G+K ++        W
Sbjct: 355 AAKKALEAAGVKDLTMKIWAMPVQRPYMPNARRTAELIQSDFAKVGVKAEI----VSFEW 410

Query: 420 DNYWLKA-------PVHFGNINPRPTPD----ILFSLLYSSEAPWNESQYKSEKFDKMLI 468
             Y  K+        V  G       PD    +L S   + E   N +Q+ +++F ++L 
Sbjct: 411 GEYLKKSTEVNRDGAVILGWTGDNGDPDNFMGVLLSCAATGEGGANRAQWCNKEFSELLS 470

Query: 469 EARGSLDQERRKAIYNEMQVMVASEAGTIIPAYISNVDAITAKLKGLEANPLG 521
           +A+ + D   R  +Y + QV+   +A     A+ +    ++AK+ G   +PLG
Sbjct: 471 KAKQTTDVAERTKLYEQAQVIFKEQAPWATLAHSTQFVPMSAKVSGFTMSPLG 523