Pairwise Alignments

Query, 374 a.a., acetylornithine deacetylase from Sinorhizobium meliloti 1021

Subject, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 98/335 (29%), Positives = 146/335 (43%), Gaps = 26/335 (7%)

Query: 44  GPEGDR-SNIFATIGPKEA----RGYIISGHMDVVPAAETG-WTSDPFRLRVEADRLYGR 97
           GP   R +N++A   P +A    R  + +GH DVVP      WTS PF       +LYGR
Sbjct: 45  GPADFRVTNLWAVRRPADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGR 104

Query: 98  GTTDMKGFLAAVLAAVPK-LAAMP-LRRPLHLALSYDEEA-GCRGVPHMIARLPELCRQP 154
           G  DMK  +AA + ++   L A+P  R  L L L+ DEE  G  G   +   L       
Sbjct: 105 GACDMKTSVAAFVTSIEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVI 164

Query: 155 LGAIIGEPTGMRAI-----RAHKGKAAARLTVRGRSGHSSRPDQGLNAIHGVAGVLTQAV 209
              I+GEPT +           +G  + +LTV+G  GH + P    N +H VA  L + V
Sbjct: 165 DYCIVGEPTAVERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELV 224

Query: 210 AEADRLVGGPFEHVFEPPY--SSLQIGTVKGGQ-AVNIIPDSCEVEFEARAISGVDPAEL 266
           A       G ++    P +  +S QI     G  A N+IP S  ++F  R  +   P  L
Sbjct: 225 AIN---AAGGWDAASNPYFQPTSWQISNFHSGTGASNVIPGSAVIDFNFRFSTESTPESL 281

Query: 267 LAPVRKTAEALTTLGFEVEWQELSAYPALSLEPDAPLA--ALLEELTGREALPAVSYGT- 323
              V    +A   + + + W  +   P L+   +   A    + + TG E   + S GT 
Sbjct: 282 QQRVHAVLDA-HQVDYTLAW-TIGGLPFLTTPGELVTAVQGAIRDETGIETELSTSGGTS 339

Query: 324 EAGLFQRAGIDAIICGPGDIGRAHKPDEYILIDEL 358
           +A    +     +  GP +    HK DE+I + E+
Sbjct: 340 DARFIAKICRQVVELGPVN-ASIHKIDEHIDVAEI 373