Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 9e-39
 Identities = 79/255 (30%), Positives = 135/255 (52%), Gaps = 5/255 (1%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M  L  + VF+ VA+ RSFTAA R L ++   V +S++ +E+ LGV+L  R+TR ++LTS
Sbjct: 1   MDSLGSLSVFVQVAETRSFTAAGRVLGVSSSAVGKSIARMEERLGVRLFHRSTRSITLTS 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
            GA++  R   ++ + +    +L +      G +RI+ P   G  LL  ++S F   +P 
Sbjct: 61  EGALFLERSRRILAEVEAAEQELSDASATPRGKLRISVPQVRG--LLMPVLSDFMRAYPD 118

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVCRVRRILVASPGYLAIFGTPE 180
           + + +  +DR +D++ E FD  +R  + P D   + R +   + +LV +PGY   +GTP+
Sbjct: 119 IELDVDFSDRMVDVIEEGFDAVIRTGK-PEDSRLMARHLGHYQLVLVGTPGYFREYGTPQ 177

Query: 181 TPDDLSRHGCIAYDEEAIS--ETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGLA 238
            P  LS H C+ +   A    E W L       +++      +   E +  +V +G G+A
Sbjct: 178 QPQHLSDHACLRHKFCATGKLEPWPLRRAPGAPESILRGPFVSTTIESLNHVVHEGLGIA 237

Query: 239 LLPHFIVGDALASAR 253
            LP ++V  A+A  R
Sbjct: 238 CLPDYMVNQAVAEGR 252