Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 293 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 4e-43
 Identities = 91/253 (35%), Positives = 136/253 (53%), Gaps = 4/253 (1%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M    D+R+F  V +  SFTAAA QL ++   V+R +  LE  LGV+LL R+TR++ +T 
Sbjct: 1   MNPFEDMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTP 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
            G  Y      L+ + +QV   +  +  +  G IR++APLS     L  ++  F   +PQ
Sbjct: 61  LGQSYYESALRLLSEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRRYPQ 120

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVCRVRRILVASPGYLAIFGTPE 180
           V+V + L+DR +D++ E +DL LR+     D + I R++  + R+  ASP YLA+ GTP 
Sbjct: 121 VAVEVDLSDRPVDLIGEGYDLVLRIGTL-EDSTLIARRIASIPRVYCASPDYLALRGTPH 179

Query: 181 TPDDLSRHGCIAYDEEAISETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGLALL 240
            PDDL+ H C+ Y        W     G+ +       +  NNG+L+      G G+  L
Sbjct: 180 KPDDLAEHDCLPYG-HGRQVQWRFK--GKVQALNVSGRMRVNNGDLLRDTAIAGLGVTYL 236

Query: 241 PHFIVGDALASAR 253
           P FIVGDAL   R
Sbjct: 237 PTFIVGDALKDGR 249