Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 299 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  154 bits (389), Expect = 3e-42
 Identities = 89/276 (32%), Positives = 148/276 (53%), Gaps = 8/276 (2%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M +L D+ VF +VA   S + AA++L  +P  +++ +  LE+ LG +L  RTTRQ+SLT 
Sbjct: 1   MANLGDLEVFASVAASGSMSLAAKELGYSPAVISKRIKRLEEKLGARLFQRTTRQISLTE 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
           AG  +  RV  ++   ++  D +      V G ++++AP S G+  +   + GF   HP 
Sbjct: 61  AGQGFYERVLAVLAGLEEAEDFVSGRANTVNGTLKVSAPTSFGRMHIAPHLKGFMERHPD 120

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVCRVRRILVASPGYLAIFGTPE 180
           +SV+L L+D FIDI+   +DLA+R+++     S + R++  VRR+L AS  Y+   G P 
Sbjct: 121 LSVNLVLSDEFIDIIEGGYDLAIRIADL-NSSSLVARRLAPVRRVLCASADYVVAHGMPA 179

Query: 181 TPDDLSRHGCIAYDEEAISETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGLALL 240
           T +DL +H C+       ++ W L   G         +L  N+ E+I + V  G G+AL 
Sbjct: 180 TIEDLKKHRCLPAHN---NDIWRLEGPGGALSIRPEGMLVTNSSEVIREAVISGLGIALR 236

Query: 241 PHFIVGDALASARRAEAGPCRVGASGALADIVLSAL 276
             + +G  L S +  +  P   G+     ++ LSA+
Sbjct: 237 STWDIGHELRSGKLVQVLPGYEGS----RNVTLSAV 268