Pairwise Alignments

Query, 419 a.a., Reverse transcriptase, maturase from Sinorhizobium meliloti 1021

Subject, 392 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score =  152 bits (383), Expect = 2e-41
 Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 28/363 (7%)

Query: 25  VKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGERVLGV 84
           +KAN+GAAG DG ++E     L      I  R+ +GTY P PVR V+IPK  GGER LG+
Sbjct: 1   MKANKGAAGADGLSIEATAAHLRTAWPGIRERVLAGTYRPMPVRRVTIPKPDGGERELGI 60

Query: 85  PTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWK-YDWVLEFDI 143
           PTV+DR+ Q  + Q+++P LD  F   S+G+RPG+SA  AV   +         V++ D+
Sbjct: 61  PTVTDRLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHGAVLAAQSLVQSGRRIVVDVDL 120

Query: 144 KGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPIL 203
           +  FD + HD+L+  + K +     +  I  +L + +  +G V ER  GTPQGG +SP+L
Sbjct: 121 EKFFDRVNHDILIDRLSKRISDKRVIRLIRAYLNSGIMDHGVVQERVMGTPQGGPLSPLL 180

Query: 204 ANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQQAEALKVELSSRLAACGLQMHPT 263
           AN+ L         R H    + RYADD  V+  S +  E +   L        L ++  
Sbjct: 181 ANVLLDEVDKELERRGH---CFVRYADDCNVYVGSRKAGERVMALLRRLYGRLHLTINEG 237

Query: 264 KTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPAVSPTALKSMRAT 323
           K+ +     ++           FLG+ F         W          V+   L + +  
Sbjct: 238 KSAVTSVFGRK-----------FLGFSF---------WRGRDGAVKRRVADKPLNAFKRR 277

Query: 324 IKSLNIPRQTPG-TLAEIAKQLNPLLRGWIAYYGRYSRSAL-STLADYVNQKLRAWIRRK 381
           ++ L   R++ G ++AE+A++L   + GW AY+       L   L +++  ++RA   + 
Sbjct: 278 VRQLT--RRSGGRSMAEVAERLRVYVLGWKAYFRLAQTPRLFKELEEWMRHRVRAIQLKH 335

Query: 382 FKR 384
           +KR
Sbjct: 336 WKR 338