Pairwise Alignments

Query, 419 a.a., Reverse transcriptase, maturase from Sinorhizobium meliloti 1021

Subject, 373 a.a., putative Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score =  148 bits (373), Expect = 3e-40
 Identities = 87/241 (36%), Positives = 136/241 (56%), Gaps = 14/241 (5%)

Query: 62  YFPPPVRAVSIPKKAGGERVLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKS- 120
           Y   P R V IPK  G +R LG+ ++ D+I Q  V  ++    +  FL  SYG+RPG+S 
Sbjct: 3   YRATPSRRVYIPKADGRQRPLGIASLEDKIVQQAVVTVLNAIYEEDFLGFSYGFRPGRSQ 62

Query: 121 --ALDAVGVTRQRCWKYDWVLEFDIKGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTA 178
             ALDA+ V  +   K +W+L+ DI   FD + H+ +L  +   +     L  I +WL A
Sbjct: 63  HDALDALTVALKG-QKVNWILDADITSFFDEIDHEWMLMFLGHRIADRRLLGLICKWLQA 121

Query: 179 PMEKNGEVIERSRGTPQGGVVSPILANLFLHYAFDLW-----MTRTHPDLPWCRYADDGL 233
            + ++G  +  ++GTPQG V+SP+LAN++LHY  DLW           D+   RYADD +
Sbjct: 122 GVMEDGRRVVATKGTPQGAVISPLLANIYLHYVLDLWARQWRQRHARGDVIIVRYADDSV 181

Query: 234 VHCQSEQQAEALKVELSSRLAACGLQMHPTKTKIV-----YCKDQRRREAYPNVTFDFLG 288
           V  +++ QA+   V+L  RLA  GL ++ +KT+++       +++R+R      TFDFLG
Sbjct: 182 VGFRTKVQAQQFLVQLQERLARFGLSLNASKTRLIEFGRFAARNRRKRGLGKPETFDFLG 241

Query: 289 Y 289
           +
Sbjct: 242 F 242