Pairwise Alignments

Query, 419 a.a., Reverse transcriptase, maturase from Sinorhizobium meliloti 1021

Subject, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 1e-46
 Identities = 118/375 (31%), Positives = 187/375 (49%), Gaps = 45/375 (12%)

Query: 21  AYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWN----RMSSGTYFPPPVRAVSIPKKA 76
           AY+ V +N+GA G DG T+     DLA  + + W     R+ +G Y P  VRAV IPK  
Sbjct: 68  AYQRVVSNKGAPGADGMTVA----DLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPKPQ 123

Query: 77  GGERVLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWK-Y 135
           GG R LG+P+V DR+ Q  ++Q + P  D LF   SYG+RPG+S   A+ + R      +
Sbjct: 124 GGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVTAGH 183

Query: 136 DWVLEFDIKGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQ 195
            W +E D++  FD + HD+L+  + + +K    L  I R+L A +   G V  R  GTPQ
Sbjct: 184 RWCVELDLEKFFDRVNHDILMACIERRIKDKCVLRLIRRYLEAGIMSGGVVSPRQEGTPQ 243

Query: 196 GGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQQAEALKVELSSRLAA 255
           GG +SP+L+N+ L         R H    + RYADD  ++ +S +  E + V +   L  
Sbjct: 244 GGPLSPLLSNILLDELDRELERRGH---RFVRYADDANIYVRSPRAGERVLVSVERFL-- 298

Query: 256 CGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQF----RPR-RVANTQWDEFFCGYTP 310
                   + ++    ++++ +       D+LGY      +PR RVA    D        
Sbjct: 299 --------RERLKLTVNRKKSQVARAWKCDYLGYGMSWHQQPRLRVARMSLDRL------ 344

Query: 311 AVSPTALKSMRATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYG-RYSRSALSTLADY 369
                    +R  ++S+   +     +A + +++NP+LRGW +Y+    S+  L  L  +
Sbjct: 345 ------RDRLRMLLRSVRARK-----MATVIERINPVLRGWASYFKLSQSKRPLEELDGW 393

Query: 370 VNQKLRAWIRRKFKR 384
           V  KLR  I R++K+
Sbjct: 394 VRHKLRCVIWRQWKQ 408