Pairwise Alignments

Query, 419 a.a., Reverse transcriptase, maturase from Sinorhizobium meliloti 1021

Subject, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  152 bits (383), Expect = 3e-41
 Identities = 107/367 (29%), Positives = 189/367 (51%), Gaps = 31/367 (8%)

Query: 21  AYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGER 80
           A + V +N+G+AG+DG ++E   +  +++ ++  +++ +G Y    VR V IPK  GG R
Sbjct: 69  ALRQVVSNKGSAGIDGMSVEELRQWFSSHYHEFQSQIITGKYRVESVREVQIPKPNGGVR 128

Query: 81  VLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWK-YDWVL 139
           +LG+PTV DR+ Q  + Q++    D  F   SYG+RP + A DA+    Q   +  DW++
Sbjct: 129 ILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRGAHDALRQAGQEVSEGRDWIV 188

Query: 140 EFDIKGLFDNLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVV 199
           + D++  FD + HD L+  +   +     L  I ++L A M K+G V +  +G PQG  +
Sbjct: 189 DIDLEKFFDTVNHDRLMWLLGTRIGDKTLLKLIGKFLRAGMLKDGLVSQGVKGMPQGSPL 248

Query: 200 SPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQQAEALKVELSSRL-AACGL 258
           SP+L+N+ L         R H    + RYADD +V  +SE  A+ +   L++ +     L
Sbjct: 249 SPLLSNIILDELDKELEVRGH---RFVRYADDLIVMVKSEPSAKRVLSSLTAFIEQRMLL 305

Query: 259 QMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPAVSPTALK 318
           +++ +K+KI      R  E       +FLG+                      +S T+ +
Sbjct: 306 KVNKSKSKI-----SRPYE------LNFLGH-------------SILIEGRLGLSKTSEQ 341

Query: 319 SMRATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYGRYSR-SALSTLADYVNQKLRAW 377
            ++A +K L   R    +L ++ K+LNP+LRGW+ Y+        L  +  ++N+++R +
Sbjct: 342 RLKAKLKQLT-QRNRGISLEQLVKELNPILRGWLNYFKNAQMIGRLKAIEGWLNRRIRCF 400

Query: 378 IRRKFKR 384
             ++ KR
Sbjct: 401 RLKQCKR 407