Pairwise Alignments

Query, 392 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 1e-38
 Identities = 88/222 (39%), Positives = 123/222 (55%), Gaps = 3/222 (1%)

Query: 172 RVILVRTFWIAALVTFACAGIGFPYAMIAASLTG-WKRDLMLAAVLLPLWTSLLVRTAAW 230
           R +L  T  +AA+ T     +G P     A +   WK  L LA +L PL    +VR+A W
Sbjct: 56  REVLSTTLQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATIL-PLMVGNVVRSAGW 114

Query: 231 FILLQEKGLINDLLQTLGLINAPLPLIFNRTGVVIAMTHVLLPFMVLPIYSVLITIPKNL 290
             LL   GL N + Q  GL+  P+ L+FNR  VV  M  ++LP MV+ + SV+  IP+N+
Sbjct: 115 LALLGNSGLFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNV 174

Query: 291 MPAAASLGAPPWRAFLRVLLPLSLRGLASGSLLVFISAIGYYITPALIGGPGDQMISSII 350
             AAA+LGA P+  F RV+LP ++ G+ +G  LVFI  +  Y TP LIGGP  +M++  I
Sbjct: 175 EEAAANLGARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEI 234

Query: 351 AFYAMGSANWGMAGALGVVLLVATL-LLYGVYARLSTGEPGR 391
               +G  NW    AL  +LL  TL ++ G+ A L    P R
Sbjct: 235 YQQFVGLNNWPFGAALAFMLLAVTLAVVLGIGALLQGRRPPR 276