Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  123 bits (308), Expect = 5e-33
 Identities = 83/251 (33%), Positives = 130/251 (51%), Gaps = 12/251 (4%)

Query: 13  LTILFLVAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADAWRRAIFNSLIIGTGTT 72
           L   FL  P+I ++  +F +S ++T     +S +W+  L   +    A + +L I   ++
Sbjct: 15  LGFAFLYIPIILLVIYSFNASRLVTV-WAGFSTQWYWSLLENEQLIDAAWVTLRIAFFSS 73

Query: 73  LLATILGTAASLGLRNRLIFFRGSMRTLF----LLPMVVPAVVLGVGMQVLLAGFGLTNS 128
           L+AT+LGT A+L L     + R   RTLF      P+V+P V+ G+ + +L         
Sbjct: 74  LVATVLGTMAALALTR---YGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVNFDRG 130

Query: 129 YAGVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRVTLPLALPGVLS 188
           +  V++AH    + FV V V   L   D  +E AA  LG  P   F ++TLPL LP V+S
Sbjct: 131 FWTVLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPLILPAVVS 190

Query: 189 GAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSIRENISPAIAAAAFLFIAATIFFGLV 248
           G +LAF  SLD++V+  F  GP   TL  +++S +R  ++P I A   + IA       V
Sbjct: 191 GFMLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAIV----TV 246

Query: 249 VVLSRFMLAKR 259
           VV+   ++ KR
Sbjct: 247 VVIVASIVTKR 257