Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  155 bits (393), Expect = 6e-43
 Identities = 87/248 (35%), Positives = 136/248 (54%)

Query: 2   PMKLAKFAFASLTILFLVAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADAWRRAI 61
           P+  A    A L  LFL+APL+ +LP++F+    + +P  SWS++W+  +F       A 
Sbjct: 5   PVSPALKIAAGLMFLFLLAPLLVVLPISFSGDDFMAFPPSSWSVKWYGAIFANSVMMNAF 64

Query: 62  FNSLIIGTGTTLLATILGTAASLGLRNRLIFFRGSMRTLFLLPMVVPAVVLGVGMQVLLA 121
           + SL +    T L+  +G  A+  L         ++  LF  P+++P +VLG+ + ++ A
Sbjct: 65  WISLALAFVVTALSLGIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLALLLVFA 124

Query: 122 GFGLTNSYAGVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRVTLPL 181
             GL  S+ G++ AH +V +P+ V  +  AL  +   VE AA  LGA P TVF RVTLP+
Sbjct: 125 PMGLIGSFQGLVAAHLIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPLTVFFRVTLPM 184

Query: 182 ALPGVLSGAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSIRENISPAIAAAAFLFIAA 241
              G++S   L F  S DEVVL+LF+ GP  +TL   M++ + +   P  AA + L +  
Sbjct: 185 MRSGLVSTTALCFLVSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMAAAISVLLVVL 244

Query: 242 TIFFGLVV 249
           T+   LVV
Sbjct: 245 TLAVVLVV 252