Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., ABC-type spermidine/putrescine transport system, permease component II from Variovorax sp. SCN45

 Score =  177 bits (448), Expect = 3e-49
 Identities = 97/255 (38%), Positives = 148/255 (58%), Gaps = 4/255 (1%)

Query: 9   AFASLTILFLVAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADAWRRAIFNSLIIG 68
           AF +L I+F++APL+ +  +AFT    LT P   +SLRWFE +F    + ++ +NSL + 
Sbjct: 10  AFNALVIVFMLAPLVVVCIVAFTPENTLTIPTTRFSLRWFEAVFAHPDFMQSFWNSLWLA 69

Query: 69  TGTTLLATILGTAASLGLRNRLIFFRGSMRTLFLLPMVVPAVVLGVGMQVLLAGFGLTNS 128
             +  +AT+L   A + +       R  +  LFL P++VP +VLGV +  L A  G T S
Sbjct: 70  LSSATIATLLAVPAGMAITRYEFAGRDFLNGLFLSPLIVPHLVLGVALLRLFALVGGTGS 129

Query: 129 YAGVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRVTLPLALPGVLS 188
           +  +++AH ++  P+ +  V+ AL G D   E AA SLGAS ATVF R+TLP+ LPGV  
Sbjct: 130 FGWLVMAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGASQATVFRRITLPMILPGVTG 189

Query: 189 GAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSIRENISPAIAAAAFLFIAAT----IF 244
           G +LAF  S DEV +++FV  P+  TL  +M+    E+I P +AA + L +A T    + 
Sbjct: 190 GWMLAFINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTACAMVL 249

Query: 245 FGLVVVLSRFMLAKR 259
              +  L R ++ +R
Sbjct: 250 LDRIYGLDRVLVGRR 264