Pairwise Alignments

Query, 333 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 338 a.a., putative Amino acid transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 2e-40
 Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 23/342 (6%)

Query: 5   LLAPACFAVGLTSLTQGAFAEECGDVVIANMNWQSIDVLANIDKIILENGYGCSAEITIG 64
           LLA     VGL S    A AE+   +    + W+S  +   I ++I+E GYG   +   G
Sbjct: 7   LLAGLLLTVGLASTDSAASAEQPAPIHFGAIGWESGALTTEILRLIVERGYGYRTDTLPG 66

Query: 65  DTVSIMTSMIEKGEPDIAPEAWLNALPEIVSRGIAEGKLISAGNALSDGGIQGWYIPKYI 124
            TVS M   + + +  +  E W    P  V    A G++ + G+ + +   +GW++P Y+
Sbjct: 67  STVS-MEVALARNDLQVIAEEWAGRSPAWVKAEQA-GQVFALGDTVKNAE-EGWWVPAYV 123

Query: 125 ADAH---------PEIKTVSDALKHPELFPAPEDSSKGAVVNGPSGWGASTTTSQLYKAY 175
            +           PE+ +V D  ++P++F  PE   KG  +N PSGW + T  SQ  KAY
Sbjct: 124 IEGDAARNLKPVAPELHSVEDLKRYPQVFSDPESPGKGRFLNSPSGWTSETVNSQKLKAY 183

Query: 176 --DGDAKGFVLVDPGSAAGLDGSIVKNYERKIGWFGYYWSPTSLLGKYPMVKLDFDAPHN 233
             DG    F     GS A +D  I     R      YYW+PT L+G+Y +++L+ + P +
Sbjct: 184 GLDGLYNNF---RSGSGAAMDAEIGSAIRRGKPVLFYYWNPTPLMGRYKLIRLE-EPPFD 239

Query: 234 AAEWKRCNTVVDCEDPTVNDWPT--DKVETLVTREFKERAGAAMDYLKTRRWDNATLNSL 291
           A  W    T+ D  +P      +   K+   V++ F+E     +   +        LN  
Sbjct: 240 AQAWA---TLTDPANPNPKGSRSLPAKLSIGVSKAFRENYPDLVSVFEQVDLPIDRLNKA 296

Query: 292 LAWMTDNQATGEDAARYFLEKNPEIWTKWLSPEIAEKVRSSL 333
           LA M++ +    +AA  FL  N E+W  WL  +IA KV +SL
Sbjct: 297 LAVMSEKRTPPREAALTFLRDNREVWKAWLPADIAAKVEASL 338