Pairwise Alignments

Query, 398 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 645 a.a., PAS domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  140 bits (354), Expect = 8e-38
 Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 4/236 (1%)

Query: 165 GHGATMQELAGFIGIALKMVRSEQELQQALEQQELLTREMSHRLKNLFTIVDGMIRISAR 224
           G    +++ AG I      +    EL++  + +EL+++E+SHR+KN+F +V  ++ +SAR
Sbjct: 403 GRAVAIRDEAGEITRWFGTLTDIDELKRLEQGRELVSQELSHRIKNIFAVVTALVALSAR 462

Query: 225 STDNKDDLVALLSGRLHALAAAHSLVRP--SFSDVQGAASNLAELLSIVTEPHEPPATGG 282
                    A L  R+ ALA AH  VRP    S     A+ L   LS + + +    TGG
Sbjct: 463 QYPEAKAFSASLRTRIAALARAHEFVRPHTETSKTTIGATTLHSFLSDLFKAYADE-TGG 521

Query: 283 RRRLSLRGPSVLCGEQSVNGLALVFHELATNAAKYGALCSENGRVDVLWQIDGDDLSITW 342
            R + +RG   +  +Q+   +AL+FHELATNAAKYGAL    G V +  +   D   +TW
Sbjct: 522 SR-VVIRGEDAVFDDQAATSVALLFHELATNAAKYGALSERGGVVTLTTERQEDRFVLTW 580

Query: 343 SEDRGTQISIPPASKGFGSTLVEATVTHQFGGTLSYDWRPVGLSVNIVMPLSILAR 398
           SE  G  I   P   GFGS+L   +V  Q GG LS +WRP GL V + +P + L+R
Sbjct: 581 SETGGPVIQGMPQRTGFGSSLASLSVEGQLGGRLSREWRPEGLQVVVDLPATALSR 636