Pairwise Alignments

Query, 473 a.a., ArcD2 arginine/ornithine antiporter from Sinorhizobium meliloti 1021

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 93/395 (23%), Positives = 166/395 (42%), Gaps = 48/395 (12%)

Query: 1   MAQKLSLFALTGMVVGSMVGAGIFSLPRTFGVATGPFGAIIAWCIAGGGMYMLARVFQSL 60
           +AQ      +T + +  ++GAG+F        A GP   ++A+  +G  + ++ R+   +
Sbjct: 13  LAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGP-AVLLAYLFSGTLVVLVMRMLGEM 71

Query: 61  AERKPDLDAGVFA-YAKEGFGDYPGFLSAFGYWIGSCIGNVSYWVLI--------KSTLG 111
           A   PD   G F+ YA +  G + GF   + YW         +WVL+           L 
Sbjct: 72  AVANPD--TGSFSTYADQAIGRWAGFTIGWLYWW--------FWVLVIPIEALAAGHILN 121

Query: 112 NFFPVFGDGNTVVAILFASVGIWLFHFMILRGIQQAAFVNTVVTVAKVIPIIAFIIILFF 171
            +FP       + A LFA + I+L     L  + +         +AKVI IIAFI + F 
Sbjct: 122 QWFP------QIDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFA 175

Query: 172 FFK--------LDLFRLNFWGGEGMPEATLLQQIQATMLATVFVFIGIEG----ASNYSR 219
                        L RL    G   P    L  +    +  +F FIG E     A+  S 
Sbjct: 176 VLMGWIPEREVSGLSRLMEEHGGFAPNG--LSAVVGAFITIMFSFIGTEAVTIAAAESSN 233

Query: 220 YAQ--ARSDIGTATIMGFIGVSALMVLVTLLPYAALTRPEIAAMSQPSMAGVLAAVVGPW 277
            AQ  AR+   T ++M  IGV  L+ +  ++       P +A++     A  L  +  P 
Sbjct: 234 PAQNIARA---TRSVMWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNI--PH 288

Query: 278 GAVFISIGVIVSVLGAYLAWSLVCAEVLYVAARTDDMPRLFGTENQNKVPAAALWLTNIV 337
             + + + V+++V     +   + + +L+   +  D P L    +   VP AA+  + I+
Sbjct: 289 AKLLVDVVVLIAVASCMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTIL 348

Query: 338 VQLFVISTYWS-QDAFALMLNLTSSMSLIPYMFVA 371
                + +Y++    F  +L  + +++L+ Y+ +A
Sbjct: 349 GAGVTLFSYFAPAGLFQFLLASSGAIALLVYLVIA 383