Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 429 a.a., efflux RND transporter periplasmic adaptor subunit from Variovorax sp. OAS795

 Score =  179 bits (453), Expect = 2e-49
 Identities = 134/388 (34%), Positives = 195/388 (50%), Gaps = 21/388 (5%)

Query: 15  VSGLLLCSAGDGVAQTG----------PVVGVMTVQVENVSPAHEFVGRVEALNAVDIRA 64
           V  L  CS GD  A  G          P VGV+     +V    E  GR+EA     +RA
Sbjct: 24  VLALAACSKGDAPAGPGGPGAGGPRPAPEVGVVVAAPGDVGLVTELPGRLEASRVAQVRA 83

Query: 65  RVEGFLERRLFAEGQNVEKGQDLFTLERTTYELALEDAQATLVGAQTNFDNAERQLQRNR 124
           R  G L +R F EG +V+ GQ LF ++      A ++AQATL  AQ N   A    +R +
Sbjct: 84  RASGILLKREFREGSDVKAGQLLFRIDPAPLVAASQNAQATLARAQANAVQARALAERYK 143

Query: 125 ALSQ-RTVSQAVIEESHAARDIARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYS 183
            L +   VS+     + AA+  A A V S +  V  A++N GY  + +PI GRIGRA  +
Sbjct: 144 PLVEANAVSKQEYANAVAAQKTAEADVASGRAAVQTAKINQGYADVTSPIAGRIGRALVT 203

Query: 184 VGSLVSPS-SEPLARVVQTDPIRVVFSVSDRTILDLRTIAGGAGKDELAKGY---ALKLR 239
            G+LV    +  LA V Q +P+ V F+ S   +L LR  A  AG+ + A G    A+ + 
Sbjct: 204 EGALVGQGDATELAVVQQINPMYVNFTQSASDVLKLRR-ALAAGQYKRANGEEAAAVTVV 262

Query: 240 LSNGEPYQQSGKLEFFGNEIDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREERPV 299
           L +G  Y   GKL F    +D  TG + +RA   N +  L+PG +V V +E  +      
Sbjct: 263 LEDGTEYAMPGKLLFSDLTVDSTTGQVTLRAEVPNPKGELLPGLYVRVRLEQAQATNAIT 322

Query: 300 VPVGSVEQDREGRFVLVVDGESRAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEG---LQ 356
           +P  +V + ++G  V VV  + + + R ++ S      WVV +GL+ GE+++V+G   LQ
Sbjct: 323 IPQQAVTRTQQGDTVSVVSADGKISQRTVKISAAKDNQWVVLDGLKAGEQVMVDGFQKLQ 382

Query: 357 RVSPGAVVEA--QSVSAGDAATDTAAPA 382
            + PG  V+A     SA + A   AAPA
Sbjct: 383 MMPPGTPVKAVPWQKSAPNGAAQPAAPA 410