Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 385 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  189 bits (480), Expect = 1e-52
 Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 6/376 (1%)

Query: 12  VLGVSGLLLCSAGDGVAQTG--PVVGVMTVQVENVSPAHEFVGRVEALNAVDIRARVEGF 69
           + GV   LL SA   VAQ    P V V    V +V  A EF+GR EA++ V IRARV G+
Sbjct: 10  IAGVFVSLLVSA-PAVAQDAQMPTVTVAKPVVRDVIDADEFIGRFEAVDEVSIRARVGGY 68

Query: 70  LERRLFAEGQNVEKGQDLFTLERTTYELALEDAQATLVGAQTNFDNAERQLQRNRALSQR 129
           L++  F +G  V+KG  LF +++  +  AL  A+A+L  A++    AE   +R  +L+  
Sbjct: 69  LDQVFFTDGAMVKKGDKLFVIDQRPFRTALSQAEASLEAARSTLVFAETTFKRTESLAGT 128

Query: 130 -TVSQAVIEESHAARDIARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSLV 188
            T+S + +++   A   A+A+V  A+  V +A L+L YT I AP+ GR+ R   S G+LV
Sbjct: 129 GTLSVSRLDDDRRALLSAQANVRGAEAAVERARLDLDYTTITAPLSGRVDRRLISPGNLV 188

Query: 189 SPSSEPLARVVQTDPIRVVFSVSDRTILDLRTIAG--GAGKDELAKGYALKLRLSNGEPY 246
                 L  +V  DPI   F V +R +L     A   G+   E A    + + +++    
Sbjct: 189 QADQTVLTTIVSLDPIDFYFDVDERRLLSYARTARERGSALQEGAGSIPVLVTIADANEP 248

Query: 247 QQSGKLEFFGNEIDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSVE 306
              GKL+F  N +D +TGT+ +RA FAN + +L PG F  V VE        +VP  ++ 
Sbjct: 249 PFEGKLDFAENRVDNETGTMRVRARFANPKFVLQPGLFGRVEVEGSNTYRAVLVPDEAIA 308

Query: 307 QDREGRFVLVVDGESRAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVVEA 366
            D+  R V VV  +   A + +R   ++    V+  GL G E ++V GL RV PG  V+ 
Sbjct: 309 ADQNERIVYVVGEDGSVATKPVRLGPRLHGYRVIRSGLTGDETVVVNGLMRVRPGVKVKP 368

Query: 367 QSVSAGDAATDTAAPA 382
           + V     A  +A  A
Sbjct: 369 ELVVLPPEAAQSAENA 384