Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 407 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  178 bits (451), Expect = 3e-49
 Identities = 119/358 (33%), Positives = 192/358 (53%), Gaps = 11/358 (3%)

Query: 34  VGVMTVQVENVSPAHEFVGRVEALNAVDIRARVEGFLERRLFAEGQNVEKGQDLFTLERT 93
           V V T + E +   +E  GR+ A    ++R R+ G +  R+F +G  V++G  L+ ++  
Sbjct: 43  VAVFTTKAEPLPITNELPGRITATRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPA 102

Query: 94  TYELALEDAQATLVGAQTNFDNAERQLQRNRALSQRTVSQA-VIEESHAARDIARASVLS 152
            +++ ++ A+ATL  AQ   D A+R   R   L +  V+     +++ AA   A A V  
Sbjct: 103 PFQVKVDSAEATLKRAQAVVDQAKRTADRQSRLKEAQVTAVQQYDDAIAALAQAEADVGI 162

Query: 153 AQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSLVSPSS-EPLARVVQTDPIRVVFSVS 211
           A+  + +A+LNL YT++ API GRIGRA  + G+LV+ +  + LA + Q DPI   F+ S
Sbjct: 163 AEAGLAEAKLNLQYTNVTAPISGRIGRALITEGALVNTNDPQNLATIQQLDPIYADFTQS 222

Query: 212 DRTILDLRTIAGGAGKDELAKGYA-LKLRLSNGEPYQQSGKLEFFGNEIDVQTGTLPIRA 270
              ++ LR  A   G+   AK  A ++L L +G PY   G+L F    +D  TG + +R 
Sbjct: 223 ATDLIRLRK-ALKDGQWMSAKNEAEVQLILDDGTPYALKGRLLFSEAAVDATTGQVTLRG 281

Query: 271 LFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSVEQDREGRF-VLVVDGESRAAVRRIR 329
            F N  + L+PG +V V ++    ++   VP  +V+++  G+  V VV+ +++   R + 
Sbjct: 282 EFPNPNNDLLPGMYVRVQIQQGLEKDAITVPQQAVQRNNAGQSQVYVVNADNKVEFRNVT 341

Query: 330 ASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVVEAQSVSAGDAATDTAAPAPRLSS 387
               VG+ W V  GL+ GEK+IVEG Q+V PGA V+             A PAP  +S
Sbjct: 342 LGRTVGERWQVTSGLKPGEKVIVEGFQKVGPGAPVQPSDWD------PNAKPAPEQAS 393