Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 402 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  189 bits (481), Expect = 9e-53
 Identities = 118/350 (33%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 28  AQTGPVVGVMTVQVEN--VSPAHEFVGRVEALNAVDIRARVEGFLERRLFAEGQNVEKGQ 85
           A   P V V   + E+  ++    F GR+EA+  V+IR RV G +    F EG  VEKG 
Sbjct: 46  AAVPPAVPVSVAKAESRRITTWESFSGRLEAIERVEIRPRVGGAILSAHFREGALVEKGD 105

Query: 86  DLFTLERTTYELALEDAQATLVGAQTNFDNAERQLQRNRAL-SQRTVSQAVIEESHAARD 144
            L T++   +  A+E A+A +  A+     A  +L+R R L +   + Q+ +++  +  D
Sbjct: 106 LLVTIDPEPFAAAVERAEAQVAAAEARVALARTELERGRKLVTTSAIPQSGVDQRLSVYD 165

Query: 145 IARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSLVSP--SSEPLARVVQTD 202
            ARA++ SA+  ++ A+L+L YT ++API GR+GR   + G+LV+   +S  L  +V  D
Sbjct: 166 EARANLRSAKAALHTAKLDLEYTEVRAPISGRVGRLNVTAGNLVTAGTASPVLTTLVSVD 225

Query: 203 PIRVVFSVSDRTILD-LRTIAGGAGKDELAKGYALKLRLSNGEPYQQSGKLEFFGNEIDV 261
           PI   F+VS+  +   L  ++  AG  +  +   +++  S  E    +G ++   NE+D 
Sbjct: 226 PIYASFNVSEEVVAAALAKLSASAGSIDAIERIPVEIGTSADEGTPITGHIQLINNEVDA 285

Query: 262 QTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSVEQDREGRFVLVVDGES 321
            TGT+ +RA   NA   L+PGQFV + +   + EE+ V+   +V  D++ +FVLVV  ++
Sbjct: 286 ATGTIRVRAELTNADGRLIPGQFVRIRIGDPQPEEKLVISDRAVSSDQDKKFVLVVGADN 345

Query: 322 RAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVVEAQSVSA 371
           +   R++          +VE GL+ GE +IV GLQRV PG VV  Q+  A
Sbjct: 346 KVEYRQVTLGPVADGLRIVENGLKPGESIIVNGLQRVRPGVVVAPQAEQA 395