Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 397 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrA from Escherichia coli ECRC62

 Score =  192 bits (487), Expect = 2e-53
 Identities = 131/390 (33%), Positives = 201/390 (51%), Gaps = 10/390 (2%)

Query: 6   FRSVDFVLGVSG-LLLCSAGDGVAQTG----PVVGVMTVQVENVSPAHEFVGRVEALNAV 60
           F  +  VL +SG L L    D  AQ G    P VGV+TV+ E +    E  GR  A    
Sbjct: 7   FTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIA 66

Query: 61  DIRARVEGFLERRLFAEGQNVEKGQDLFTLERTTYELALEDAQATLVGAQTNFDNAERQL 120
           ++R +V G + +R F EG ++E G  L+ ++  TY+   + A+  L  AQ   + A+  +
Sbjct: 67  EVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTV 126

Query: 121 QR-NRALSQRTVSQAVIEESHAARDIARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGR 179
            R  + L  + +S+   +++ A    A A+V +A+  V  A +NL YT + +PI GRIG+
Sbjct: 127 NRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGK 186

Query: 180 AAYSVGSLV-SPSSEPLARVVQTDPIRVVFSVSDRTILDLR-TIAGGAGKDELAKGYALK 237
           +  + G+LV +  +  LA V Q DPI V  + S    L L+  +A G  K E  K   + 
Sbjct: 187 SNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKA-KVS 245

Query: 238 LRLSNGEPYQQSGKLEFFGNEIDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREER 297
           L  S+G  + Q G LEF    +D  TG++ +RA+F N    L+PG FV   +E       
Sbjct: 246 LITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNA 305

Query: 298 PVVPVGSVEQDREG-RFVLVVDGESRAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEGLQ 356
            +VP   V +   G   VLVV  + +   R I AS  +G  W+V EGL+ G+++++ GLQ
Sbjct: 306 ILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQ 365

Query: 357 RVSPGAVVEAQSVSAGDAATDTAAPAPRLS 386
           +V PG  V+AQ V+A +     +   P  S
Sbjct: 366 KVRPGVQVKAQEVTADNNQQAASGAQPEQS 395