Pairwise Alignments

Query, 303 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score =  178 bits (451), Expect = 1e-49
 Identities = 99/257 (38%), Positives = 143/257 (55%), Gaps = 5/257 (1%)

Query: 19  PRAALITIGLFVALGTFA----PWLAPQDPSAQNLLEAGVGPNGAHWLGTDHLGRDTFSR 74
           P  ALI  GL V L   A     W +P DP   +L+     P+ AHWLGTD  GRD FSR
Sbjct: 19  PANALIGGGLLVVLIALALMGLVW-SPFDPLKIDLMSRFQAPSAAHWLGTDEFGRDVFSR 77

Query: 75  LIIAANTSLVSVGSVLAIAMTIGIAMGTIAGYHRGWVDDVLMRVVDVGLSIPSLIIALAV 134
           L+I A TSL      +++A+  G  +G +AGY RGW D VLM   D  L+ P +++AL +
Sbjct: 78  LLIGARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAFPGILMALGI 137

Query: 135 IGIVGPGYWTMVMALALAWWPMSGRISRAVAVSIMSKPHIEALRVLGASPWRIYFNHLLP 194
           + I+G   + +V+AL +A+ P   R+ R   +S+    +IEA RV+G S       H+ P
Sbjct: 138 MAIIGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSELYTMLRHIAP 197

Query: 195 GTIGAVMVYATADAGVAALAVATLSFLGLGIQPPTPEWGQMLVDALPYLESDPRQVILPG 254
             +  + V AT+  G A L+ + LSFLGLG+ PP   WG ML  + PY+ S P   + PG
Sbjct: 198 NCLAPLCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIASAPWLGVFPG 257

Query: 255 LALTAAVIGFNTLGESI 271
           L +   ++  N  G+++
Sbjct: 258 LFICLTLLAINLFGDAL 274