Pairwise Alignments

Query, 303 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  201 bits (510), Expect = 2e-56
 Identities = 99/249 (39%), Positives = 143/249 (57%)

Query: 23  LITIGLFVALGTFAPWLAPQDPSAQNLLEAGVGPNGAHWLGTDHLGRDTFSRLIIAANTS 82
           L+ +   V    FAPWLAP DP+AQN+ +  + P  AHWLGTD LGRD  SR+I     +
Sbjct: 41  LVILAAMVLAALFAPWLAPFDPNAQNVQQRLLPPGAAHWLGTDQLGRDLLSRVIYGTRPT 100

Query: 83  LVSVGSVLAIAMTIGIAMGTIAGYHRGWVDDVLMRVVDVGLSIPSLIIALAVIGIVGPGY 142
           L+ V  V  ++  +G+ +G  AGY  GW+D +LMRV D+ ++ P L++ALA++ ++GPG 
Sbjct: 101 LLIVSLVALLSAPLGLLLGMCAGYFGGWIDTLLMRVTDIFMAFPRLVLALALVAVLGPGI 160

Query: 143 WTMVMALALAWWPMSGRISRAVAVSIMSKPHIEALRVLGASPWRIYFNHLLPGTIGAVMV 202
              V+A+A+  WP   RI+R    ++     I+A RV G  P RI F HLLP  + + +V
Sbjct: 161 VNAVIAIAITAWPAYARIARTETRTVRGSDFIQAARVQGLRPARILFGHLLPICLPSTVV 220

Query: 203 YATADAGVAALAVATLSFLGLGIQPPTPEWGQMLVDALPYLESDPRQVILPGLALTAAVI 262
             T D     L  A L FLGLG QPP  EWG M+     Y+        +PG+A+    +
Sbjct: 221 RVTLDMAGIILTAAGLGFLGLGAQPPMSEWGAMISTGRQYIFDQWWVAAVPGVAILLGSL 280

Query: 263 GFNTLGESI 271
            FN +G+ +
Sbjct: 281 AFNLVGDGL 289