Pairwise Alignments

Query, 303 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  171 bits (432), Expect = 2e-47
 Identities = 96/262 (36%), Positives = 142/262 (54%), Gaps = 7/262 (2%)

Query: 14  RLNKMPRAA----LITIGLFVALGTFAPWLAPQDPSAQNLLEAGVGPNGAHWLGTDHLGR 69
           +L KM  A     L  I L   +G F  W  P DP      +    P+  HWLGTD  GR
Sbjct: 2   KLRKMNAAIGGTILGAIALAAGIGLF--W-TPFDPVTLGYAKRLAAPDAVHWLGTDEFGR 58

Query: 70  DTFSRLIIAANTSLVSVGSVLAIAMTIGIAMGTIAGYHRGWVDDVLMRVVDVGLSIPSLI 129
           D  SRL+ AA TS       +A A+ +G  +G ++GY RGW D VLM   D  L+ P ++
Sbjct: 59  DVLSRLMTAAATSARISVLTVATAVLLGTLVGVLSGYLRGWTDRVLMAFNDALLAFPGIL 118

Query: 130 IALAVIGIVGPGYWTMVMALALAWWPMSGRISRAVAVSIMSKPHIEALRVLGASPWRIYF 189
           +AL  + + G   + +V+AL +A+ P   RI R   +S+    +I A R++G S + I +
Sbjct: 119 LALGFLAVAGANEYGIVVALGIAYAPSVARIVRGTVMSLREMDYIAASRLMGNSEFFIVW 178

Query: 190 NHLLPGTIGAVMVYATADAGVAALAVATLSFLGLGIQPPTPEWGQMLVDALPYLESDPRQ 249
            H+LP  +  ++V AT+  G A LA + LSFLGLG+ PP P WG ML  + P++      
Sbjct: 179 RHVLPNCVAPLVVLATSMFGWALLAESALSFLGLGVPPPAPTWGNMLAGSRPFIAKAVWL 238

Query: 250 VILPGLALTAAVIGFNTLGESI 271
            I PG  ++  ++G N LG+++
Sbjct: 239 AIFPGACISLTLLGINLLGDAL 260