Pairwise Alignments

Query, 303 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  184 bits (468), Expect = 2e-51
 Identities = 98/258 (37%), Positives = 149/258 (57%), Gaps = 2/258 (0%)

Query: 16  NKMPRAALITIGLFVALGTFAPWLAPQDPSAQNLLEAGVGPNGA--HWLGTDHLGRDTFS 73
           N++    L+ I   + +  FA  LAP +P   +L  A + P G   + LGTD  GRD  S
Sbjct: 42  NRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDDQGRDILS 101

Query: 74  RLIIAANTSLVSVGSVLAIAMTIGIAMGTIAGYHRGWVDDVLMRVVDVGLSIPSLIIALA 133
           RLI  +  +L  V  V  IA  IG+ +GT++GY  GWVD +LMR+ D+ L+ P L++ALA
Sbjct: 102 RLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFPKLVLALA 161

Query: 134 VIGIVGPGYWTMVMALALAWWPMSGRISRAVAVSIMSKPHIEALRVLGASPWRIYFNHLL 193
           ++  +GPG    V+A+A+  WP   RI+RA  ++  +   I A++++GASP+RI   H++
Sbjct: 162 LVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGASPFRIVLKHVM 221

Query: 194 PGTIGAVMVYATADAGVAALAVATLSFLGLGIQPPTPEWGQMLVDALPYLESDPRQVILP 253
           P  + +++V  T D     L  A L FLGLG QPP PEWG M+     ++        +P
Sbjct: 222 PLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQWWVAAMP 281

Query: 254 GLALTAAVIGFNTLGESI 271
           G+A+    +GFN LG+ +
Sbjct: 282 GIAILIVSLGFNLLGDGL 299