Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., Oligopeptide transport ATP-binding protein OppD from Xanthobacter sp. DMC5

 Score =  273 bits (698), Expect = 4e-78
 Identities = 159/326 (48%), Positives = 200/326 (61%), Gaps = 12/326 (3%)

Query: 1   MQNEPLLSVSNLTVDLLTAKSAVRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLM 60
           M    LL V +LTV   T    +  VD +S+ +  GE LAIVGESG GK+V   A L L+
Sbjct: 1   MTRPALLDVKDLTVRFRTPAGRLTAVDRLSFDIAAGETLAIVGESGCGKSVTAMALLRLL 60

Query: 61  PSGVATQLSGS-VRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEM 119
            S  A ++SGS VRF+G EL+ L ER +R  RG  I  IFQDP+SALNPVR +  QI E 
Sbjct: 61  RSPPA-EISGSHVRFEGTELLALSERAMRDVRGNRIAMIFQDPLSALNPVRTVADQIIES 119

Query: 120 AELHLNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLL 179
            + H  +   A   RA++L+ LV I +P  R   +PH  SGG+RQR++IAIA+A  P+LL
Sbjct: 120 LKRHTGLRGPALHRRAVELLDLVRIPEPQRRADDYPHHFSGGMRQRVMIAIAIAANPRLL 179

Query: 180 IADEPTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGAER 239
           IADEPTTALDVTVQAQIL+L+  LQ    M+++LI+HD+GVVA  AD VLVMYA R  E 
Sbjct: 180 IADEPTTALDVTVQAQILKLIVSLQKEFGMSLLLISHDLGVVAETADRVLVMYAGRKVEE 239

Query: 240 GPVDKVLVNPRHPYTKGLINAIP----RREDPVGSEFRGLPGVPPTLGAPINGCAFAPRC 295
            PV  +   P HPYT+ L+ A P    RRE         +PG+ P+L     GCAFAPRC
Sbjct: 240 RPVADLFARPLHPYTRALMRARPTPGLRRE-----LLDEIPGIVPSLADLPPGCAFAPRC 294

Query: 296 EFAVAECARSRPPMTATADSSVFVAC 321
             A   CAR +P +         VAC
Sbjct: 295 AHADEACARLQPVLEGVGGGG-SVAC 319