Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 342 a.a., Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  261 bits (668), Expect = 1e-74
 Identities = 144/329 (43%), Positives = 202/329 (61%), Gaps = 6/329 (1%)

Query: 5   PLLSVSNLTVDLLTAKSAVRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLM--PS 62
           PLL + +L V+  T    +  VD VS ++ +GE L IVGESGSGK+V   A +GL+  P 
Sbjct: 2   PLLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFPG 61

Query: 63  GVATQLSGSVRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEMAEL 122
            V  +    +RF G+EL+G+ ++  R   GK +  IFQ+P ++LNP   IG Q+ E   L
Sbjct: 62  RVRAE---HMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRL 118

Query: 123 HLNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLLIAD 182
           HL +  R A+ RA +L++ VGI   ++RL  +PH+LSGG+ QR++IA+A+A  P+LLIAD
Sbjct: 119 HLKLDKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIAD 178

Query: 183 EPTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGAERGPV 242
           EPTTALDVT+QAQIL LL+DLQ    MA+VLITH+MGVV+  A  + VMYA +  E   V
Sbjct: 179 EPTTALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRV 238

Query: 243 DKVLVNPRHPYTKGLINAIPRREDPVGSEFRGLPGVPPTLGAPINGCAFAPRCEFAVAEC 302
           D +  +P+HPYT+ L+ A+P R  P G     + G+ P +     GC FAPRC +     
Sbjct: 239 DHLFASPQHPYTEALLAALPERVAPEG-RLATISGMVPGVHDRPAGCLFAPRCSYVTERA 297

Query: 303 ARSRPPMTATADSSVFVACPIVNQGKAAA 331
              RP +     + V    P+   G+ AA
Sbjct: 298 CHVRPALREWQGAEVRCHFPLGEPGRKAA 326