Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 555 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  236 bits (603), Expect = 8e-67
 Identities = 121/262 (46%), Positives = 170/262 (64%)

Query: 2   QNEPLLSVSNLTVDLLTAKSAVRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLMP 61
           Q+  ++   N+ V        V  V ++S+ + +GE +AIVGESGSGK+V     +GL+ 
Sbjct: 21  QDNAIIDARNIAVTFKVEHGTVEAVKDISFQLYRGETIAIVGESGSGKSVTARTIMGLLT 80

Query: 62  SGVATQLSGSVRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEMAE 121
              +   S +VRF G +++    R+ R  RG  I  IFQ+PMS+LNP+  IG QI E   
Sbjct: 81  KRASVSKSATVRFNGDDILRFSSRQRRALRGNRISMIFQEPMSSLNPIYTIGSQIVEAIR 140

Query: 122 LHLNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLLIA 181
           +H  +S + AE RALDL++ V I +P ARL Q+PH+LSGG RQR++IA+AL+ +P +LIA
Sbjct: 141 VHSRLSRKEAEARALDLLRQVQIPEPEARLKQYPHQLSGGQRQRVMIAMALSNDPDVLIA 200

Query: 182 DEPTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGAERGP 241
           DEPTTALDVTVQAQIL L++DLQ +  MA+VLITHD+ +V   +D V VM      E   
Sbjct: 201 DEPTTALDVTVQAQILNLIRDLQKKRGMAVVLITHDLTIVKQFSDYVYVMQHGEMREHNT 260

Query: 242 VDKVLVNPRHPYTKGLINAIPR 263
            +++   P+HPYTK L+ + PR
Sbjct: 261 TERLFAAPQHPYTKRLLASEPR 282



 Score =  158 bits (400), Expect = 3e-43
 Identities = 96/236 (40%), Positives = 139/236 (58%), Gaps = 9/236 (3%)

Query: 26  VDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLMPSGVATQLSGSVRFQGQELIGLPER 85
           VD +  ++++ E L +VGESGSGKT    + L L        + G V F G+ + G    
Sbjct: 323 VDSLGLTLKRHETLGLVGESGSGKTTFGQSLLRLNEP-----VGGEVIFDGERVDGRSRS 377

Query: 86  EIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEMAELH-LNMSPRAAEERALDLVKLVGI 144
           E+R  R + +  +FQDP ++LNP   IG+ I E   ++ L  +     ER  D ++  G+
Sbjct: 378 EMRPLRSR-MQIVFQDPFASLNPRMTIGQIIEEGLIINGLGRTKAERLERVRDALEAAGM 436

Query: 145 SDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLLIADEPTTALDVTVQAQILRLLKDLQ 204
             P   LS+FPHE SGG RQRI IA A+A EP+ ++ DEPT+ALD++VQAQI+ LL+ LQ
Sbjct: 437 --PGNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIDLLRKLQ 494

Query: 205 HRLNMAMVLITHDMGVVAGAADNVLVMYAARGAERGPVDKVLVNPRHPYTKGLINA 260
               ++ + I+HD+ VV      V+VM   R  E GPV+ VL NP+  YT+ L+ A
Sbjct: 495 DERGLSYLFISHDLKVVRALCHRVIVMQGGRIVEEGPVEDVLTNPKTEYTQRLVRA 550