Pairwise Alignments

Query, 304 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 319 a.a., Tyrosine recombinase XerD from Xanthobacter sp. DMC5

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 32/247 (12%)

Query: 63  RLLTVRRFALSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGPD-- 120
           RL  VR+F   L+AE  R + P+A L G   R R  P + + EE+  LI+ A     +  
Sbjct: 77  RLSAVRQFFRFLYAEGHRGDDPAAVLEG-PRRGRPLPKVLTVEEVSTLIETAHARAAEVP 135

Query: 121 ------------DSIRSLTYATMFGLIAATGMRVSEAIAIRLHDVTDDG-LIIAQTKFKK 167
                       + ++    A +  L+ A+G+R+SE +++        G  I+   K +K
Sbjct: 136 AGEGEAAGKARAEMLKRRRTAAVVELLYASGLRISELVSLPAAAARARGDAILVTGKGRK 195

Query: 168 SRLLPLHTTTRRALDGYLATRLKAASQSDALFISHQGTPLAYPT---VITVFLQIIRSIG 224
            RL+PL    R A+  YL  R KAA    + ++        Y T         ++  + G
Sbjct: 196 ERLVPLSDPARAAMAAYLDAR-KAAGLEASRWLFPSSGESGYVTRQQAARDLKELALAAG 254

Query: 225 LRGAPGSRGPRIHDLRHTFAVRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQST 284
           L   P    P  H LRH FA   L H A         +  + T LGHA V+ T  Y    
Sbjct: 255 L--DPAKLSP--HVLRHAFASHLLAHGA--------DLRVVQTLLGHADVSTTQIYTHVL 302

Query: 285 PELMAHM 291
            E +  M
Sbjct: 303 DERLKSM 309