Pairwise Alignments

Query, 304 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 303 a.a., site-specific tyrosine recombinase XerD from Variovorax sp. OAS795

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 17/165 (10%)

Query: 131 MFGLIAATGMRVSEAIAIRLHDVT-DDGLIIAQTKFKKSRLLPLHTTTRRALDGYLATRL 189
           M  L+ A+G+RVSE +A+++ D++ +DG++    K  K RL+P     RR ++ YL    
Sbjct: 144 MLELMYASGLRVSELVALKVIDMSLNDGVLRVLGKGNKERLVPFGGEARRWIERYLEESR 203

Query: 190 KA---ASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPGSRGPRIHDLRHTFAVR 246
            A     Q+  LF++ +G  +   T +  ++ + +     G      P  H LRH FA  
Sbjct: 204 PAILDGQQTPDLFVTSRGAGM---TRVMFWIIVKKQATAAGIHVPLSP--HTLRHAFATH 258

Query: 247 SLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQSTPELMAHM 291
            L H A         + A+   LGHA ++ T  Y     E +  +
Sbjct: 259 LLNHGA--------DLRAVQLLLGHADISTTTIYTHVARERLKQL 295