Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 82/296 (27%), Positives = 124/296 (41%), Gaps = 37/296 (12%)

Query: 126 LRVHRGLAERTIARHLRHLHKLLPEL-----GTPTLDYDAALIRNVVREW--RERTGPAD 178
           L   R L+E+T+  + R   + L  L     G P L    AL    +R +  + R G A 
Sbjct: 42  LAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQRRKGGAG 101

Query: 179 LRTI---TSALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSSLPRYLAAADVERVIASCD 235
            RT+    + LRS+LR+L   GL       A+    Q +  SLP+ L   +  +V+ +  
Sbjct: 102 ARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPK--SLPKALTDREALKVVTADA 159

Query: 236 QLTRG---RLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVRLPLPQ 292
           QL        R+ A+L LL   GLR  +   L  +D       LR++GK  +   +P+  
Sbjct: 160 QLAEEPWIAARNAAVLTLLYGCGLRIAEALDLTPADFSGPVTSLRVTGKGGKTRIVPMIA 219

Query: 293 DVGDALLAY-------IEQERPRMHQEAVFLTMIAPYRSFAQSSHVSTIVALALK--RAG 343
              +A+  Y       IE E P              +R    +     I+   ++  RA 
Sbjct: 220 AAAEAVETYRKLCPYHIEPEEPI-------------FRGARGAKLQPAIIQREMQKLRAA 266

Query: 344 ISDPPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQV 399
           +  P S     LRHS AT +L  G  L  +  +L H SL  T  Y  VD+A L ++
Sbjct: 267 LGLPDSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEI 322