Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 329 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 32/226 (14%)

Query: 184 SALRSYLRFLAGVGLCRPNLDHAIPPVLQWRL-----------SSLPRYLAAADVERVIA 232
           +A++S+ R+L          +H +P VL   L            +L   L+  +V+ ++ 
Sbjct: 85  AAVKSFFRYL----------EHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLN 134

Query: 233 SCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTS-GMLRLSGKARRQVRLPLP 291
           + D+ +   +RDRA+L L    GLR  ++ GL L   +  S   + + GK RR+  LPL 
Sbjct: 135 APDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPLW 194

Query: 292 QDVGDALLAYIEQERPRMHQEAVFLT-----MIAPYRSFAQSSHVSTIVALALKRAGISD 346
           Q+   A+ A+I   RP+    A+FL      M      +    H +  V++A   A  S 
Sbjct: 195 QETAAAIRAWIAV-RPKNGDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLATKSI 253

Query: 347 PPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVD 392
            P     +LRHS A  ML++   +  V   L H SL  T  Y + D
Sbjct: 254 SPH----VLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRAD 295