Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 16/291 (5%)

Query: 119 LDDYQSWLRVHRGLAERTIARHLRHLHKLLPELGTPTL-----DYDAALIRNVVREWRER 173
           +  ++ +L++ + L+  ++  + R + KL+  +    L     D   A++R+ + EW   
Sbjct: 7   IKQFEEYLKLEKSLSRHSVEAYERDVRKLVDFMDAKGLQVAPEDMKPAILRDFL-EWINE 65

Query: 174 TG--PADLRTITSALRSYLRFLAGVGLCRPNLDHAIP-PVLQWRLSSLPRYLAAADVERV 230
            G  P       S +R++ +FL    + + +    I  P L  +L   P  LA  ++E++
Sbjct: 66  LGMTPHSQARTLSGIRAFYKFLIMEDMMQTDPTDTIEAPKLDRKL---PDTLAFHEIEQL 122

Query: 231 IASCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVRLPL 290
           +++ D  T    R+RA+L  L   GLR  ++  LR+S++   +G L++SGK  ++  +P+
Sbjct: 123 LSAIDLSTPEGTRNRAMLETLYSSGLRVSELLDLRISNLYADAGFLKISGKGEKERLVPI 182

Query: 291 PQDVGDALLAYIEQERPRMHQEAVFLTMIAPYRSFAQSSHVS--TIVALALKRAGISDPP 348
            +D    +  Y +  R  ++ +     ++   R  A+ S V   TI+     +AGI    
Sbjct: 183 GRDALKHIQLYRDGIRCHLNIKKGNEDILFLNRRGAKMSRVMVFTIIKDLTAKAGIQKTV 242

Query: 349 STGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQV 399
           S      RHS AT ++  GA L AV  +L H S+  T  Y  +D   L+QV
Sbjct: 243 SPHT--FRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDYLKQV 291