Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 298 a.a., Tyrosine recombinase XerD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 26/297 (8%)

Query: 119 LDDYQSWLRVHRGLAERTIARHLRHL-------HKLLPELGTPTLDYDAALIRNVVREWR 171
           ++ +   L + R LAE T++ + R L       H     L T   D    L+   V    
Sbjct: 8   IEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGY 67

Query: 172 ERTGPADLRTITSALRSYLRFLAGVGLCR--PNLDHAIPPVLQWRLSSLPRYLAAADVER 229
           + T  A L    SA+R + + L         P+   A P + Q     LP+ L+ A VER
Sbjct: 68  KATSSARL---LSAMRRFFQHLYREKYREDDPSAQLASPKLPQ----RLPKDLSEAQVER 120

Query: 230 VIAS--CDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVR 287
           ++ +   DQ     LRD+A+L +L   GLR  ++ GL +SDI    G++R+ GK  ++  
Sbjct: 121 LLQAPLIDQPLE--LRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERL 178

Query: 288 LPLPQDVGDALLAYIEQERPRMHQEAVFLTMIAPYRSFAQSSHVS---TIVALALKRAGI 344
           +PL ++    L  Y+E  RP +    V + ++ P +   Q +  +    I   A+  AGI
Sbjct: 179 VPLGEEAVYWLETYLEHGRPWL-LNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAV-LAGI 236

Query: 345 SDPPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQVAQ 401
            D       +LRH+ AT +L  GA L  V  +L H  L  T  Y  V    L Q+ Q
Sbjct: 237 -DSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQ 292