Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 24/297 (8%)

Query: 118 LLDDYQSWLRVHRGLAERTIARH---LRHLHKLLPELGTPTLDYDAALIRNVVREWRERT 174
           L++ +   L + R LAE T++ +   LR L   L       L    + +++ + E  E  
Sbjct: 8   LIEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAERLEGG 67

Query: 175 GPADLRT-ITSALRSYLRFLAGVGLCRPNLDHAIPPVLQWRLSS-LPRYLAAADVERVIA 232
             A     + SA+R   ++L      +   D    P+   +L   LP+ L  A V+ ++A
Sbjct: 68  YKATSSARLLSAMRRLFQYLYRE---KQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLA 124

Query: 233 SCDQLTRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSGKARRQVRLPLPQ 292
           +        LRD+A+L LL   GLR  ++ GL +SD+    G++R+ GK  ++  +PL +
Sbjct: 125 APVTDQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGE 184

Query: 293 DVGDALLAYIEQERPRMHQEAVFLTMIAPYRS--------FAQSSHVSTIVALALKRAGI 344
           +    L  Y+E  RP +        +    R+        + +  H +T+ ++       
Sbjct: 185 EAVYWLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASI------- 237

Query: 345 SDPPSTGACLLRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYAKVDAAMLEQVAQ 401
            D       +LRH+ AT +L  GA L  V  +L H  L  T  Y  V    L  + Q
Sbjct: 238 -DSNKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQ 293