Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 511 a.a., transposase from Pseudomonas simiae WCS417

 Score =  163 bits (412), Expect = 1e-44
 Identities = 117/361 (32%), Positives = 170/361 (47%), Gaps = 24/361 (6%)

Query: 8   NASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKI 67
           N  Q  P+    L      L ++   M   +   + +  +L   IA LK+  F K SE++
Sbjct: 6   NLDQMTPEQLRALAEQAIQLLSQVDSMGQKIHRLETVNEQLAHEIAILKRHKFAKRSEQL 65

Query: 68  EREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARER 127
             +   L   L D  IAA E           AV   P  + P +  +R P +  K  R  
Sbjct: 66  SPDQGSLLDDLLDADIAAIEAELN-------AVNPRPAPTEPRQKPKRAP-LPPKFPRTV 117

Query: 128 KELDPGTCCPDCGGELRLVGEDVSEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSR 187
              +P      CG +L+ +GEDVSE LD       V +  R K +CR CE ++Q P P++
Sbjct: 118 IRHEPENTQCTCGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQ 177

Query: 188 PIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLI 247
            I   +  AGLLA+++V+KF DHLPLYR  +IF R G  I  STL  W G+    LQPL+
Sbjct: 178 VIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLMIARSTLAQWVGQTGVQLQPLV 237

Query: 248 ERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAV 307
           + +   V++  ++HAD+TP+++L          K   +  +W Y     P+  +A    V
Sbjct: 238 DALREAVLAESVIHADETPVQMLAPG------EKKTHRAYVWAY--STTPF--SALNAVV 287

Query: 308 YYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHD 367
           Y F+P    EH  + L   +G L  D + GY   +E G   IG      C AH RR F D
Sbjct: 288 YDFSPSRAGEHARNFLGAWNGKLVCDDFAGYKAGFEKGMTEIG------CMAHARRKFFD 341

Query: 368 I 368
           +
Sbjct: 342 L 342