Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 583 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  158 bits (400), Expect = 4e-43
 Identities = 125/378 (33%), Positives = 180/378 (47%), Gaps = 44/378 (11%)

Query: 32  AKMSATLQAHDQLIG-------ELRLRIAKLKKQVFGKSSEKIEREIQQL-ELALEDLLI 83
           A+  A LQ  D+ I        ++   +A+LK+  FG  SE +  E ++L E  L +   
Sbjct: 64  AERDALLQRKDREIALREAKIEKITFELARLKRWKFGAKSEAMNAEQRRLFEETLAEDEA 123

Query: 84  AAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSE-----KAARERKELDPGTCC-P 137
              E   +   E  AA  AA  +    K   RRPR +      +      E +   C  P
Sbjct: 124 GLREQLERLRREAAAAAAAAAASDTTTKAPSRRPRRNPFPDHLRRVEHHHEPERTDCLEP 183

Query: 138 DCGGELRLVGEDVSEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAG 197
            CG  +  +G++VSE LD++ A+  V      K +CRCC+ + Q P+ +  I G +A +G
Sbjct: 184 GCGRPMTRIGQEVSERLDIVPAEFFVHRHIYGKWACRCCQVLRQAPSVAEVIEGGIAASG 243

Query: 198 LLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSS 257
            +A+ L+S+F DH+P YR   I AR G   P STL    G+A   LQPL E     ++S 
Sbjct: 244 FVAHTLISRFVDHMPYYRQTTINARSGVHTPRSTLASITGQAGAALQPLHEAHRRFILSC 303

Query: 258 DLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEE 317
            +LHAD+TP+     SL D G GK  ++  +W Y R    W     PG +Y F P    +
Sbjct: 304 AVLHADETPV-----SLLDPGAGK-TRRAYVWAYARS---WHDKV-PGVIYEFCPGRGAQ 353

Query: 318 HV-------HHHLRQTSGILQADGYKGYGKLYEPG--ADGIGRFREAACWAHWRRDF--- 365
           +          H R+ SG L +D Y  Y  + +P    D +G    AAC AH RR+F   
Sbjct: 354 YPLAFLGGRERHGRRWSGTLLSDRYSAYETVVDPRLYPDRLG----AACAAHARRNFEEL 409

Query: 366 -HD---IVDLEQIRDRAR 379
            HD   +V LE +R  AR
Sbjct: 410 THDGTSVVGLEAVRRFAR 427