Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 524 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  107 bits (267), Expect = 9e-28
 Identities = 99/358 (27%), Positives = 167/358 (46%), Gaps = 42/358 (11%)

Query: 25  AALQAENAKMSATLQAHDQLIGELRL----------RIAKLKKQVFGKSSEKIEREIQQL 74
           AALQ   A+ +   +  + L+GELR+          R+  L+ Q+F   SE   R  +Q 
Sbjct: 11  AALQQALAEAT---RRSESLVGELRVVTTERDLALERLRALQGQLFAAKSEA--RGSEQK 65

Query: 75  ELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARE--RKEL-D 131
           +L L +    A    T P +  D    +  VA    K   R+P +     R+  R EL +
Sbjct: 66  DLFLNEAEALAPTAQTLPAESDDEE--STTVAGHQRKKRGRKP-LDPALPRDIVRHELPE 122

Query: 132 PGTCCPDCGGELRLVGEDVSEILDMIAAQMKVIEVARLKKSCRCCEKMVQL-PAPSRPIP 190
               C   G  L  +G +VSE + +I  Q++V++  R+K +C CC+  +++ P P+R IP
Sbjct: 123 SERVCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLSLKVAPTPARIIP 182

Query: 191 GSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERI 250
             +      A+++  K+   +PLYR   +  R G +I  +TL     R    +QP+I  +
Sbjct: 183 RGLLTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVRIGLAVQPVINLL 242

Query: 251 EAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYF 310
              ++ SDL++ D+T ++VL    R     K   K  +W  +       G+ PP  ++ +
Sbjct: 243 RDHLLDSDLIYGDETTVQVLKEPGR-----KAQTKSYMWAQMN------GSGPPVRLFAY 291

Query: 311 APDWKEEH---VHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDF 365
           AP     H   ++  +R+ +  + +DGY    ++Y+  A G G      CW H RR F
Sbjct: 292 APGRGAMHADKLYAGIRRGATFV-SDGY----QVYDGIAAGHG-LTHLGCWVHARRPF 343