Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 510 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 4e-41
 Identities = 114/359 (31%), Positives = 163/359 (45%), Gaps = 29/359 (8%)

Query: 16  DPAFLKAMIAA-LQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKIEREIQQL 74
           +P  L ++ A  L+   A++   ++    L+ +L    A LK+  F   SE+   E + L
Sbjct: 4   EPQSLDSLSAEQLRELTARLMVQVRHQSALLEKLTHENALLKRMKFAAQSERFNPEQKSL 63

Query: 75  ELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARERKELDPGT 134
              LED + A   +      E+DA       A+  +K  +R P  +    RE +     T
Sbjct: 64  ---LEDEIEA---DLAAVASEIDALTQTQAPATPDKKQAKRLPLPAHLPRREVRHEPAST 117

Query: 135 CCPDCGGELRLVGEDVSEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMA 194
            C  CG +++ VGEDV+E LD +     V    R K +C  CE + Q P  +  I   + 
Sbjct: 118 TCA-CGCQMKRVGEDVAEKLDYMPGVFSVERHIRGKWACARCESITQAPVEAHVIDKGIP 176

Query: 195 GAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVV 254
             GLLA +LV K+ DHLPLYR   IF R G  IP STL  W G     LQPL++ ++  +
Sbjct: 177 TTGLLAQVLVGKYADHLPLYRQEAIFGRAGLAIPRSTLAQWVGTCGVRLQPLVDALKTEI 236

Query: 255 MSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDW 314
           +   +LHAD+TP+ +L       G GK   +  +W Y     P A  +    VY F    
Sbjct: 237 LGHRVLHADETPVAML-----KPGDGK-THRAYLWAYA----PGAFESIKAVVYDFCESR 286

Query: 315 KEEHVHHHL-----RQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHDI 368
             EH  H L     +   G L  D + GY  L   G   +G      C AH RR F D+
Sbjct: 287 SGEHARHFLGHGTDKAWKGSLTCDDFSGYKALIASGVTEVG------CLAHARRKFFDL 339