Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  139 bits (351), Expect = 2e-37
 Identities = 112/381 (29%), Positives = 177/381 (46%), Gaps = 40/381 (10%)

Query: 6   MSNASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSE 65
           M +  +NLPDDP  LK ++  +  E A   +        I  L   +A L++++FG+ +E
Sbjct: 1   MISMPENLPDDPVLLKQLLEQMIHERASDKSK-------IVHLEEEVALLRQRLFGRKTE 53

Query: 66  KI-EREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRR--PRVSEK 122
           +  +    QL L  E      AE+  +PLDE D     AP   R ++       PR+   
Sbjct: 54  QTGDAATPQLPLFDE------AESLAEPLDEADDEEVVAPTKRRGKRKPLPADLPRIEVV 107

Query: 123 AARERKELDPGTCCPDCGGELRLVGEDVSEILDMIAAQMKVIEVARLKKSCRCCEKM-VQ 181
                 EL   TC   CG     +GE+VSE L+++  Q++VI+  R    CR CE   V 
Sbjct: 108 HELPEHEL---TCA--CGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVT 162

Query: 182 LPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQ 241
              P++ I  SMA   +LA +L +K+ D LPL+R  ++  R G DIP  TL  W  +  +
Sbjct: 163 ADKPAQMIEKSMASPSVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSE 222

Query: 242 VLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGA 301
             QPL+  +   ++ S ++H D+T ++VL    R+          + W +V+   P    
Sbjct: 223 HFQPLLNLMRESLLKSRIIHCDETRVQVLKEPGRE-------PSSQSWMWVQTGGP---P 272

Query: 302 APPGAVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHW 361
             P  ++ +A    +E     L    G +  D Y GY  L     DG+ R     CWAH 
Sbjct: 273 DRPVILFDYATSRAQEVPVRLLDGYRGYVMTDDYAGYNAL--AAQDGLERL---GCWAHA 327

Query: 362 RRDFHDIVDLEQIRDRARGSR 382
           RR F   V+ ++++ + +  R
Sbjct: 328 RRKF---VEAQKVQPKGKTGR 345