Pairwise Alignments

Query, 263 a.a., CpaB2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 337 a.a., Flp pilus assembly protein RcpC/CpaB from Sphingobium sp. HT1-2

 Score =  102 bits (253), Expect = 1e-26
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 21/257 (8%)

Query: 3   RIVILLLALASGGAASWLA---LGTGDQRAVEVAEV-QETPSQEVLVAAAELKRGAVIEE 58
           +IV+L+ AL      + LA   L +     V  A +  E     VLVA   L  G +++ 
Sbjct: 5   KIVLLVGALIIAVTTALLARSMLSSSSTPQVNAAAMPNEADQPHVLVATKALPVGTILDA 64

Query: 59  NQLRWQPWEGEIPPVFISRSSRPDATTALKGSLALSGFVAGEPIRDDKLAQ-GGTGYLSS 117
              R+QPW  ++         + D    L GS+  +   AG+P+    + + G  G+L++
Sbjct: 65  ESFRFQPWPKDLIEAAYYLKGQADPLK-LAGSVVRNAITAGQPLTQGAVIRPGDRGFLAA 123

Query: 118 LLPSGKRAIAVRVTAESTAGGFILPNDHVDVIHTVARPDASGDAGKVVSRAILSNIRVLA 177
            L  G RA+ V V+A++   GF+ P D +D++ T         A   VS  IL N+RVLA
Sbjct: 124 ALGPGMRAVTVPVSAQNAVAGFVFPGDRIDLVLTQTVSGGGDGAPLKVSETILRNLRVLA 183

Query: 178 VDQ-TVSQASDGASVIG--KTATLEVDPEQISAVAAAEASGTVSLALRAITDNHEASVVE 234
            DQ T +   DG  V+      T+EV P+    +A ++  G++SL+LR+I D   AS ++
Sbjct: 184 TDQRTDAMGPDGKPVVQTYSNVTVEVTPKIAEKLAVSQTIGSLSLSLRSIADT--ASDLD 241

Query: 235 A----------EGTRPG 241
           A          +GT PG
Sbjct: 242 AAIAGSDVDLPDGTNPG 258