Pairwise Alignments

Query, 586 a.a., CpaE2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 427 a.a., components of type IV pilus from Agrobacterium fabrum C58

 Score =  309 bits (791), Expect = 2e-88
 Identities = 165/412 (40%), Positives = 243/412 (58%), Gaps = 3/412 (0%)

Query: 15  EAPQPMTAAP---LLPIPKVDIAVFCQSEEVREAVGTAAIDRRMARATVTVKAGGMKEAT 71
           EA  P+ A+    L P+P++ I  FC S+ ++  +   + DRR++R T+ V  G +  A 
Sbjct: 15  EAEPPLRASDMDRLRPLPRISIHAFCVSDTMQAVMEALSSDRRLSRVTLRVTKGDINAAA 74

Query: 72  ALYGGVTSPNLVVVESDDGEARLMATLETLAMECVTGTKVIVIGRSNDVGLYKKLLDAGV 131
            ++    +PNL+++E+    A L+  L  LA  C   T+VI+IGR ND+ LY+ L+  G+
Sbjct: 75  TMFSASPTPNLIILETASATASLLNDLAPLAEVCDPSTRVIIIGRHNDITLYRDLIRNGI 134

Query: 132 SDYLVKPLEPMDFVAAVHRCFRDSTEEKLGRIVAFVGAKGGTGSSTLAHNVAYAMSKRVD 191
           S+YLV P+   D + ++   F D   E LGR +AF+GAKGG GSST+AHN A+ +S    
Sbjct: 135 SEYLVAPVNMADLLGSIAAIFVDPEAEPLGRNIAFIGAKGGVGSSTIAHNCAFGISSLFS 194

Query: 192 ADVLLADLDLQSGTLGLNFDIEAKHGMVDVLQSPDRLDDVLLRRLAVSYTDRLHLLPATT 251
            + +LAD+DL  GT  ++FD +   GM + + SP+RLD+V L RL    +D L LL A +
Sbjct: 195 TETILADMDLAYGTANIDFDQDPAQGMAEAVFSPERLDEVFLDRLLTKCSDHLSLLAAPS 254

Query: 252 DLDKFINLREGDVDHLLDVARSSSWHVVVDLPHILTQWTRKILLEADEIVVTATPDLAGM 311
            LD+  +L       +L+V + S+   V+DLPH    WTR +L EADE+V+TA PDLA +
Sbjct: 255 LLDRTYDLDRQAFLPILEVLQRSAPVAVLDLPHQWCDWTRAVLAEADEVVITAVPDLANL 314

Query: 312 RNAKNLIDFLKKARPNDPPPRLVLNKVGTPKLQEIKPKDFVAAVGLEEGVSLAFEPSLFG 371
           RN KNL D L K RPND  P LVLN+VG PK  EI P DF+  + +E    + F+  LFG
Sbjct: 315 RNTKNLFDALIKLRPNDKLPHLVLNQVGMPKRPEITPADFLEPLEIEPIAIIPFDAQLFG 374

Query: 372 AAANNGRLVIESAPDSKAGKAIVSLAWRVGGTRERRTRQKGVKALLQKVFKR 423
            AAN+GR++ E    S+  +    +A  + G    R  ++G    L+ + KR
Sbjct: 375 NAANSGRMISEMDEKSQTAETFSQIAHTITGRSVLRKNRRGGLEKLKNILKR 426