Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 563 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 8e-13
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 25/200 (12%)

Query: 226 GPTLTIRKFKKEKLTLDQLVRFGSISPEG---AEVLKIIGRVRCNVLISGGTGSGKTTLL 282
           G ++ +R   ++ +  D    F S+  +G   A  L ++ R    +L++G TGSGKTT L
Sbjct: 282 GESVVLRLLDRQTVQFD----FPSLGFDGQRLASFLDLLERPHGILLVTGPTGSGKTTTL 337

Query: 283 NCLTGYIDHGER-VITCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRP 341
                 ++  ER +IT ED  E QL+  + ++++   P I     +     +++ +R  P
Sbjct: 338 YTALSRLNTTERKIITVEDPVEYQLEGINQIQVK---PAI----GLDFAGALRSIVRQDP 390

Query: 342 ERIIVGEVRGPEAFDL-LQAMNTGHDGSMGTLHANSPREAMARIEAMITMGGSS-LPAKT 399
           + I++GE+R  E   + +Q+  TGH   + TLH NS   A A I  ++ MG  S L A T
Sbjct: 391 DVIMIGEIRDLETCRIAIQSSLTGH-LVLSTLHTNS---AAASITRLMDMGVESYLIAST 446

Query: 400 I----REMLVSSVDVIVQAA 415
           +     + LV  +D + + A
Sbjct: 447 VSGILAQRLVRRLDPVTRVA 466