Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

 Score =  147 bits (371), Expect = 6e-40
 Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 23/303 (7%)

Query: 140 GPLEPLLARD-DIADIMVNGANQVFIE--VNGRVQETGIRFR--DNEQLLNICQRIVSQV 194
           GPL      D D+ +IM+N    ++++    GR    G+     D E+++ +   + + V
Sbjct: 25  GPLIAAALEDPDVVEIMLNPDRTLWVDRLSTGRAP-MGVELSEADGERIIRL---VAAHV 80

Query: 195 GRRVDESSPICDARLGD-GSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPE 253
           G  V    P+  A L + G R   I PP A  GP   +RK     + L + +  G ++  
Sbjct: 81  GTEVHRGQPLLTAELPETGERFEGILPPAA-PGPAFALRKRAFGVIPLSRYIEDGMMTAA 139

Query: 254 GAEVLKIIGRVRCNVLISGGTGSGKTTLLNCLTGYIDH-GERVITCEDAAELQLQQPHVV 312
            A +L    R R N+LI+GGT +GKTTL N L   I   G+RV+  ED  ELQ      V
Sbjct: 140 QAGLLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHV 199

Query: 313 RLETRPPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTL 372
            L TR      QG ++M  LV++ +R+RP+R+IVGEVRG EA DL++   TGH G + T+
Sbjct: 200 PLRTR------QGVVSMTELVRSSMRLRPDRVIVGEVRGAEALDLIKVWGTGHPGGIATI 253

Query: 373 HANSPREAMARIEAMITMGGSSLPAKTIREMLVSSVDVIVQAARLRDGSRRITHITEVLG 432
           HA S   A+ R+E +I     + P    R ++  +V+V++  A  R   RRI  I  V+G
Sbjct: 254 HAGSALGALLRLEQLILEVAENPP----RALIAEAVNVVIHIAG-RGRKRRIESIARVVG 308

Query: 433 MEG 435
            +G
Sbjct: 309 FDG 311