Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 466 a.a., pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  667 bits (1721), Expect = 0.0
 Identities = 336/461 (72%), Positives = 385/461 (83%), Gaps = 5/461 (1%)

Query: 37  AVQPVVENELQAAHAPVQVRKPPQVPATAKPEN-----AEQYYSLKKEIFSALIATIDVA 91
           AVQPV      A      V  P +  A A P+      AE YY  K ++FSALI TID++
Sbjct: 3   AVQPVPVERSAAPVLGETVAAPSRPQAAAPPQRRRAPRAEDYYDTKSQVFSALIDTIDLS 62

Query: 92  ALSNMDGEQARNEIGAIINDIVAAKKAGISMAEQNDLLSDICNDILGYGPLEPLLARDDI 151
            LS +D E AR EI  I+NDI+  K   +S++EQ +LL DICND+LGYGPLEPLLARDDI
Sbjct: 63  QLSKLDIESAREEIRDIVNDIITIKNFAMSISEQEELLDDICNDVLGYGPLEPLLARDDI 122

Query: 152 ADIMVNGANQVFIEVNGRVQETGIRFRDNEQLLNICQRIVSQVGRRVDESSPICDARLGD 211
           ADIMVNGA Q+FIEV G+V+E+ IRFRDN QLL+ICQRIVSQVGRRVDESSPICDARL D
Sbjct: 123 ADIMVNGAGQIFIEVGGKVEESEIRFRDNGQLLSICQRIVSQVGRRVDESSPICDARLPD 182

Query: 212 GSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPEGAEVLKIIGRVRCNVLIS 271
           GSRVNVIAPPLAIDG  LTIRKFKK+KLTL+QLVRFGSI+PE A +L+IIGRVRCN++IS
Sbjct: 183 GSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAVLLQIIGRVRCNIVIS 242

Query: 272 GGTGSGKTTLLNCLTGYIDHGERVITCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRN 331
           GGTGSGKTTLLNCLT YID  ER+ITCED+AELQLQQPHVVRLETRPPNIEG+GEITMR+
Sbjct: 243 GGTGSGKTTLLNCLTRYIDSTERIITCEDSAELQLQQPHVVRLETRPPNIEGEGEITMRD 302

Query: 332 LVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSPREAMARIEAMITMG 391
           LVKNCLRMRPERIIVGEVRGPE FDLLQAMNTGHDGSMGT+HAN+PRE ++R+E+MI MG
Sbjct: 303 LVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGSMGTIHANTPRECLSRMESMIAMG 362

Query: 392 GSSLPAKTIREMLVSSVDVIVQAARLRDGSRRITHITEVLGMEGEVVTTQDLFVYDILGE 451
           G +LPA+T+RE++  SVDVI+QA+RLRDGSRRITHITEV GMEG+V+ TQDL  Y+I GE
Sbjct: 363 GYTLPARTVREIISGSVDVIIQASRLRDGSRRITHITEVTGMEGDVIITQDLMRYEIDGE 422

Query: 452 DEKGNIIGRHRSTGIGRPAFWDRARYYGEEARLAAALDAAE 492
           D  G I+GRH STGIGRP FWDRARY+ E+ RLAA LDA E
Sbjct: 423 DANGRIVGRHVSTGIGRPHFWDRARYFNEDKRLAATLDAME 463