Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 491 a.a., component of type IV pilus from Agrobacterium fabrum C58

 Score =  669 bits (1725), Expect = 0.0
 Identities = 340/488 (69%), Positives = 390/488 (79%), Gaps = 17/488 (3%)

Query: 22  MFGKKSIS--EERTAEAAVQPVVENELQAAHAP----VQVRKPPQVPATA---------- 65
           MFGK+        T    V P V  ++  A  P        +P Q P T           
Sbjct: 1   MFGKRGPEGPARSTKLEPVAPAVSMQVATASEPRSPATDTLEPGQSPVTRQVTTGAPLSQ 60

Query: 66  -KPENAEQYYSLKKEIFSALIATIDVAALSNMDGEQARNEIGAIINDIVAAKKAGISMAE 124
            K    E YY+ K ++FSALI TID++ L+ +D E AR EI  I+NDI+  K   +S+AE
Sbjct: 61  KKRARTEDYYNTKSQVFSALIDTIDLSQLAKLDAESAREEIRDIVNDIITIKNFAMSIAE 120

Query: 125 QNDLLSDICNDILGYGPLEPLLARDDIADIMVNGANQVFIEVNGRVQETGIRFRDNEQLL 184
           Q +LL DICND+LGYGPLEPLLARDDIADIMVNG+ Q FIEV G+  E+ IRFRDN QLL
Sbjct: 121 QEELLEDICNDVLGYGPLEPLLARDDIADIMVNGSGQTFIEVGGKTIESDIRFRDNAQLL 180

Query: 185 NICQRIVSQVGRRVDESSPICDARLGDGSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQL 244
           +ICQRIVSQVGRRVDESSPICDARL DGSRVNVIAPPLAIDGP LTIRKFK++KLTLDQL
Sbjct: 181 SICQRIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLAIDGPALTIRKFKRDKLTLDQL 240

Query: 245 VRFGSISPEGAEVLKIIGRVRCNVLISGGTGSGKTTLLNCLTGYIDHGERVITCEDAAEL 304
           VRFG+I+PEGA +LKIIGRVRCNV+ISGGTGSGKTTLLNCLT +ID  ERVITCED AEL
Sbjct: 241 VRFGAITPEGATLLKIIGRVRCNVVISGGTGSGKTTLLNCLTSFIDKDERVITCEDTAEL 300

Query: 305 QLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTG 364
           QLQQPHVVRLETRPPNIEG+GEITMR+LVKNCLRMRPERI+VGEVRGPE FDLLQAMNTG
Sbjct: 301 QLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIVVGEVRGPEVFDLLQAMNTG 360

Query: 365 HDGSMGTLHANSPREAMARIEAMITMGGSSLPAKTIREMLVSSVDVIVQAARLRDGSRRI 424
           HDGSMGTLHAN+PRE ++RIE+MI MGG +LPAKT+RE++  S+DV++QAARLRDGSRRI
Sbjct: 361 HDGSMGTLHANTPRECLSRIESMIAMGGFTLPAKTVREIISGSIDVVIQAARLRDGSRRI 420

Query: 425 THITEVLGMEGEVVTTQDLFVYDILGEDEKGNIIGRHRSTGIGRPAFWDRARYYGEEARL 484
           T ITEV+GMEG+V+ TQDL  Y+I GED +G +IGRH STGI +P FWDRARYYGE+ RL
Sbjct: 421 TQITEVIGMEGDVIVTQDLMRYEIEGEDAQGRLIGRHVSTGISKPHFWDRARYYGEDKRL 480

Query: 485 AAALDAAE 492
           AAALD  E
Sbjct: 481 AAALDEME 488