Pairwise Alignments

Query, 333 a.a., Pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 293 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 62/223 (27%), Positives = 113/223 (50%), Gaps = 7/223 (3%)

Query: 111 GATLATWVVMLLLLGLGPLVSVGFA----IAGGLLLPHLYVNMKRNARFTRFAAEFPNAV 166
           G  L+ WVV +LL   G L++ G      I G  LL  +Y++ +   R  R   + P  +
Sbjct: 71  GLWLSAWVVGVLL---GWLLADGLGLIAMIVGPPLLLRVYISWRYQRRVQRMVEQLPQLL 127

Query: 167 DVIVRGLKAGLPMPDCLRVIAMEAQEPVKGEFLAIVQDQTLGIPVDEAVKRMSERMPLAE 226
           D  VR LK+G  + D +       + P+K     + ++  +G+ + ++V   +E     E
Sbjct: 128 DHSVRSLKSGRTLADSVLGGIEGVEAPLKDAMGRVQRNVRMGVSLPDSVSDFAEFYEQDE 187

Query: 227 ANFFAIVVAIQSRTGGSLSEALGNLSKVLRERKKMKGKIKAMSSEAKSSAGIIGALPFLV 286
              FA+ + +  R GG+ SE L NL K++RER++   ++KAM+ E + +A ++G LP L+
Sbjct: 188 FRLFALGLKVNHRYGGNASELLENLIKMIREREQGARQLKAMTGETRMTAYVLGGLPVLI 247

Query: 287 AGAVYFMSPDYMALLFTTMIGKVVVVGCGLWMGIGILVMRKMI 329
            G    ++P Y+  ++    G++++         G  VM +M+
Sbjct: 248 VGYFMMVNPSYLMTMWNDDTGRIMLFSALAMDLGGTFVMWRML 290