Pairwise Alignments

Query, 453 a.a., chemotaxis protein CheR from Sinorhizobium meliloti 1021

Subject, 419 a.a., chemotaxis protein CheR from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 1e-28
 Identities = 94/359 (26%), Positives = 153/359 (42%), Gaps = 8/359 (2%)

Query: 53  LGSDEDLTEDVISAVTVAETHFFRGPEQFELIRQTILPELLRRRPEGSPLRIWSVGCATG 112
           L S ED  + +I AV V ET FFR PE F  + +     L   + +   LRI S+ C+TG
Sbjct: 50  LQSSEDEQQALIEAVIVPETWFFRYPESFATLARLAKARLAEIK-QMRALRILSLPCSTG 108

Query: 113 EEPYSLAILCQEEGLL-DGVRIDAADISRRALAAAKTGDYGEWALRNTGPRLRQRYFTSC 171
           EEPYS+A+   + GL     ++   D+S  ++  A+ G YG  + R      R R+FT  
Sbjct: 109 EEPYSIAMALLDAGLAPHQFKVLGLDVSPLSVERARRGVYGRNSFRGGDIAFRDRHFTEY 168

Query: 172 EGRFRLNERLRGQVDFAHLNLGTDALPAPEKRLSEFDLILCRNVLVYLEASAVRRIARQL 231
           +  + + ER+R QV     NL    L A E   + +D + CRN+L+Y +    +++   L
Sbjct: 169 DDGYHIAERVREQVRLQVGNLLDPGLLANE---ASYDFVFCRNLLIYFDQPTQKQVFDVL 225

Query: 232 LDCLSDGGWLLTAPTDPPLWKYAPFETSITPAGIVYRRIMAP-DTRKSSTACVAPVQRQT 290
                  G L   P +  L       +   P    + R   P           AP+  ++
Sbjct: 226 KGLTHVDGVLFIGPAEGSLLGRHGMRSIGVPQSFAFSRHAEPVKPEPVFVPIAAPIPPRS 285

Query: 291 GNPVAGV--PLARARAAASRKTTGDDTAKAIARQIRSRFDLGEPREAARLAARAIERHPL 348
             P+     P + ARA           A  +  +I +  + G+  EA     + +  HP 
Sbjct: 286 AAPIPTKPRPFSTARAQVVPIKAPHTDAGDLLGRIATLANEGKSAEARAACEQYLSNHPP 345

Query: 349 SAELHFLEGVSRMASGETDAAKAALRRVAYLDGKLAAAQFLLGVCLKDSDPRAALRALE 407
           +A++ +  G+    +G    A+   R+  YL+ +   A   L   L+     A  R L+
Sbjct: 346 AAQVFYWLGLLSDVAGSALEAQGYYRKALYLEPQHPQALMHLAALLESQGDSAGARRLQ 404