Pairwise Alignments

Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  342 bits (876), Expect = 1e-97
 Identities = 220/632 (34%), Positives = 338/632 (53%), Gaps = 55/632 (8%)

Query: 462  RGKTARFEISVRDAGG-----EERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEI 516
            R +  + E  VR   G     E+R   V  AP     G+  R+L   RDIT  K   ++ 
Sbjct: 347  RSEDYQVEYRVRHGDGHWVWIEDRGRAVERAP----SGRVTRMLGTRRDITAGKALEEQ- 401

Query: 517  SRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLNENARKLLQVG-DEALGRVFWKL 575
               QR A       S+V E+  + +++LD D+++  +N+   ++     D+ +GR   +L
Sbjct: 402  ---QRLA-------STVFEAASEGIVILDPDYKLIAVNQAFSRVTGFETDDMIGRNVVEL 451

Query: 576  ---------FPEEEEG--SFAKHCREVMDRRVRSFFEDHLSSLGRWVEANASPTRDG--- 621
                     FP   +   S      E+++ R             +W++ N      G   
Sbjct: 452  PSSRDARRHFPVIRQALLSHGTWQGELVETRKNG------ELYPQWLQLNVVRDVRGKVS 505

Query: 622  -ISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEALNESNHA-- 678
             I  F  D++ RR +EE       +M ++  +D LTGLANR  FRE   EA         
Sbjct: 506  HIVGFFADLSARRESEE-------RMRYLTHYDELTGLANRSLFRERLREAHQRVRQGGR 558

Query: 679  RMAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLT 738
             +A+L ++LD FK +ND+LGH   D LL++++ RLI A+   +T+ARL GDEFA++    
Sbjct: 559  NLALLHINLDRFKLLNDSLGHEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAY 618

Query: 739  ESRDEAFRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSA 798
             +     R+A RL+  L  P ++EG    V  S+G++  P++      L+  +++A+  A
Sbjct: 619  GNLSSLARVATRLLAKLRVPVTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQHA 678

Query: 799  KSSGRGTYKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALL 858
            K  G   ++ +  ++ A      Q++  +R A+ +G+  + YQP + L +  ++  EAL+
Sbjct: 679  KHLGGNNFQFYTDSLQASTLERLQLENHLRKAIEEGQLTVFYQPKLCLATGKLNAAEALI 738

Query: 859  RWRHPERGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPER----VSVAVNLSPV 914
            RW HP+ GM+ P +FI +AEETGLIVP+GE++L EAC QA  W  +    + V+VNLS  
Sbjct: 739  RWEHPQWGMVPPGDFIGLAEETGLIVPLGEFVLREACWQACEWQRQGLAPIRVSVNLSVH 798

Query: 915  QFKHRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDF 974
            Q +   LV  V + L  T LDP  L+LE+TE+ LLD  EH +   Q LR LGVK+A+DDF
Sbjct: 799  QLRQGKLVSLVRQVLEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGVKLAIDDF 858

Query: 975  GTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETE 1034
            GTGYSSL YL+  P D +K+DQ F+R L  G+E  AI +A+  +   L +    EGVE +
Sbjct: 859  GTGYSSLSYLKRIPVDYVKIDQTFIRGLGQGREDAAITRAIIAMAHGLALKVVAEGVEDQ 918

Query: 1035 DQLAVVDSEGFNEVQGYLFSRPLPAAEISKLI 1066
             QL  +  E  +EVQGYL SRP+ A  ++ L+
Sbjct: 919  QQLDFLRGERCDEVQGYLISRPMEAKGLADLL 950



 Score = 60.8 bits (146), Expect = 5e-13
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 13/242 (5%)

Query: 318 IHPDDRQAVQETFFRATAGK-EPVRSEYRLRRADGSWAWVIDVGQP-RFSADGTFLGYVG 375
           +HPDD   ++        G+ E  + EYR+R  DG W W+ D G+    +  G     +G
Sbjct: 328 LHPDDLPLLKRALVEHLKGRSEDYQVEYRVRHGDGHWVWIEDRGRAVERAPSGRVTRMLG 387

Query: 376 SVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAP 435
           +  DIT  +A E    E Q    ++F+++ + + +LD + + + +N+A  R+ G  E   
Sbjct: 388 TRRDITAGKALE----EQQRLASTVFEAASEGIVILDPDYKLIAVNQAFSRVTGF-ETDD 442

Query: 436 VTGQTWDSIGRASDADK-VEAAWESVRRGKTARFEISVRDAGGEERCMDVISAPITDHHG 494
           + G+    +  + DA +      +++    T + E+      GE     +    + D  G
Sbjct: 443 MIGRNVVELPSSRDARRHFPVIRQALLSHGTWQGELVETRKNGELYPQWLQLNVVRDVRG 502

Query: 495 KPFRILSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLN 554
           K   I+  + D++ A+R S+E  R   H     D+L+ +   ++    L +A  RVR   
Sbjct: 503 KVSHIVGFFADLS-ARRESEERMRYLTH----YDELTGLANRSLFRERLREAHQRVRQGG 557

Query: 555 EN 556
            N
Sbjct: 558 RN 559